Related references
Note: Only part of the references are listed.SARS-CoV-2 RNA dependent RNA polymerase (RdRp) targeting: an in silico perspective
Abdo A. Elfiky
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS (2021)
SARS-CoV-2 and SARS-CoV: Virtual screening of potential inhibitors targeting RNA-dependent RNA polymerase activity (NSP12)
Zijing Ruan et al.
JOURNAL OF MEDICAL VIROLOGY (2021)
RNA-dependent RNA polymerase of SARS-CoV-2 as a therapeutic target
Yanyan Wang et al.
JOURNAL OF MEDICAL VIROLOGY (2021)
Arguments in favour of remdesivir for treating SARS-CoV-2 infections
Wen-Chien Ko et al.
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS (2020)
Systematic Comparison of Two Animal-to-Human Transmitted Human Coronaviruses: SARS-CoV-2 and SARS-CoV
Jiabao Xu et al.
VIRUSES-BASEL (2020)
Structural Basis for RNA Replication by the SARS-CoV-2 Polymerase
Quan Wang et al.
CELL (2020)
Remdesivir is a direct-acting antiviral that inhibits RNA-dependent RNA polymerase from severe acute respiratory syndrome coronavirus 2 with high potency
Calvin J. Gordon et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2020)
Structure of the RNA-dependent RNA polymerase from COVID-19 virus
Yan Gao et al.
SCIENCE (2020)
Novel coronavirus treatment with ribavirin: Groundwork for an evaluation concerning COVID-19
Jahan S. Khalili et al.
JOURNAL OF MEDICAL VIROLOGY (2020)
Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins
Suhas Srinivasan et al.
VIRUSES-BASEL (2020)
Comparative Antiviral Activity of Remdesivir and Anti-HIV Nucleoside Analogs against Human Coronavirus 229E (HCoV-229E)
Keykavous Parang et al.
MOLECULES (2020)
Hopes rise for coronavirus drug remdesivir
Heidi Ledford
NATURE (2020)
Remdesivir triphosphate can efficiently inhibit the RNA-dependent RNA polymerase from various flaviviruses
Eva Konkolova et al.
ANTIVIRAL RESEARCH (2020)
The genetic sequence, origin, and diagnosis of SARS-CoV-2
Huihui Wang et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2020)
RNA-Dependent RNA Polymerase as a Target for COVID-19 Drug Discovery
Wei Zhu et al.
SLAS DISCOVERY (2020)
Structural Basis of the Potential Binding Mechanism of Remdesivir to SARS-CoV-2 RNA-Dependent RNA Polymerase
Leili Zhang et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2020)
Nucleotide Analogues as Inhibitors of SARS-CoV-2 Polymerase, a Key Drug Target for COVID-19
Minchen Chien et al.
JOURNAL OF PROTEOME RESEARCH (2020)
Analysis of SARS-CoV-2 RNA-dependent RNA polymerase as a potential therapeutic drug target using a computational approach
Syed Ovais Aftab et al.
JOURNAL OF TRANSLATIONAL MEDICINE (2020)
Ribavirin, Remdesivir, Sofosbuvir, Galidesivir, and Tenofovir against SARS-CoV-2 RNA dependent RNA polymerase (RdRp): A molecular docking study
Abdo A. Elfiky
LIFE SCIENCES (2020)
A promising antiviral candidate drug for the COVID-19 pandemic: A mini-review of remdesivir
Chengyuan Liang et al.
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY (2020)
Sofosbuvir as a potential alternative to treat the SARS-CoV-2 epidemic
Rodrigo Jacome et al.
SCIENTIFIC REPORTS (2020)
Remdesivir-bound and ligand-free simulations reveal the probable mechanism of inhibiting the RNA dependent RNA polymerase of severe acute respiratory syndrome coronavirus 2
Shruti Koulgi et al.
RSC ADVANCES (2020)
Rapid review for the anti-coronavirus effect of remdesivir
Ziyi Li et al.
DRUG DISCOVERIES AND THERAPEUTICS (2020)
Update on the target structures of SARS-CoV-2: A systematic review
Manisha Prajapat et al.
INDIAN JOURNAL OF PHARMACOLOGY (2020)
Drug-drug interactions of a two-drug regimen of dolutegravir and lamivudine for HIV treatment
Dario Cattaneo et al.
EXPERT OPINION ON DRUG METABOLISM & TOXICOLOGY (2019)
Mechanism of Inhibition of Ebola Virus RNA-Dependent RNA Polymerase by Remdesivir
Egor P. Tchesnokov et al.
VIRUSES-BASEL (2019)
New Nucleoside Analogues for the Treatment of Hemorrhagic Fever Virus Infections
Erik De Clercq
CHEMISTRY-AN ASIAN JOURNAL (2019)
A Structure-Function Diversity Survey of the RNA-Dependent RNA Polymerases From the Positive-Strand RNA Viruses
Hengxia Jia et al.
FRONTIERS IN MICROBIOLOGY (2019)
Detecting early stage structural changes in wild type, pathogenic and non-pathogenic prion variants using Markov state model
Vinod Jani et al.
RSC ADVANCES (2019)
Favipiravir as a potential countermeasure against neglected and emerging RNA viruses
Leen Delang et al.
ANTIVIRAL RESEARCH (2018)
Parallelization of CPPTRAJ Enables Large Scale Analysis of Molecular Dynamics Trajectory Data
Daniel R. Roe et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2018)
Favipiravir (T-705), a broad spectrum inhibitor of viral RNA polymerase
Yousuke Furuta et al.
PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES (2017)
Coronavirus infections in horses in Saudi Arabia and Oman
M. G. Hemida et al.
TRANSBOUNDARY AND EMERGING DISEASES (2017)
Markov state models of protein misfolding
Anshul Sirur et al.
JOURNAL OF CHEMICAL PHYSICS (2016)
Spread of Mutant Middle East Respiratory Syndrome Coronavirus with Reduced Affinity to Human CD26 during the South Korean Outbreak
Yuri Kim et al.
MBIO (2016)
ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB
James A. Maier et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2015)
PyEMMA 2: A Software Package for Estimation, Validation, and Analysis of Markov Models
Martin K. Scherer et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2015)
In silico prediction of ebolavirus RNA polymerase inhibition by specific combinations of approved nucleotide analogues
Formijn J. van Hemert et al.
JOURNAL OF CLINICAL VIROLOGY (2015)
DOCK 6: Impact of New Features and Current Docking Performance
William J. Allen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2015)
PLIP: fully automated protein-ligand interaction profiler
Sebastian Salentin et al.
NUCLEIC ACIDS RESEARCH (2015)
Structural basis for RNA replication by the hepatitis C virus polymerase
Todd C. Appleby et al.
SCIENCE (2015)
Markov state models of biomolecular conformational dynamics
John D. Chodera et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2014)
A decade after SARS: strategies for controlling emerging coronaviruses
Rachel L. Graham et al.
NATURE REVIEWS MICROBIOLOGY (2013)
MMPBSA.py: An Efficient Program for End-State Free Energy Calculations
Bill R. Miller et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2012)
Markov models of molecular kinetics: Generation and validation
Jan-Hendrik Prinz et al.
JOURNAL OF CHEMICAL PHYSICS (2011)
Molecular Dynamics Simulations of Viral RNA Polymerases Link Conserved and Correlated Motions of Functional Elements to Fidelity
Ibrahim M. Moustafa et al.
JOURNAL OF MOLECULAR BIOLOGY (2011)
Structural Survey of Zinc-Containing Proteins and Development of the Zinc AMBER Force Field (ZAFF)
Martin B. Peters et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2010)
Automatic discovery of metastable states for the construction of Markov models of macromolecular conformational dynamics
John D. Chodera et al.
JOURNAL OF CHEMICAL PHYSICS (2007)
Stabilization of poliovirus polymerase by NTP binding and fingers-thumb interactions
Aaron A. Thompson et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Automatic atom type and bond type perception in molecular mechanical calculations
Junmei Wang et al.
JOURNAL OF MOLECULAR GRAPHICS & MODELLING (2006)
Development and testing of a general amber force field
JM Wang et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Molecular model of SARS coronavirus polymerase: Implications for biochemical functions and drug design
X Xu et al.
NUCLEIC ACIDS RESEARCH (2003)
Coronavirus 229E-related pneumonia in immunocompromised patients
F Pene et al.
CLINICAL INFECTIOUS DISEASES (2003)