4.7 Article

Cross-Comparison of Human iPSC Motor Neuron Models of Familial and Sporadic ALS Reveals Early and Convergent Transcriptomic Disease Signatures

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

Single-cell transcriptomic analysis of Alzheimer's disease

Hansruedi Mathys et al.

NATURE (2019)

Article Biochemistry & Molecular Biology

Single-Cell Multi-omic Integration Compares and Contrasts Features of Brain Cell Identity

Joshua D. Welch et al.

Review Biochemistry & Molecular Biology

Current best practices in single-cell RNA-seq analysis: a tutorial

Malte D. Luecken et al.

MOLECULAR SYSTEMS BIOLOGY (2019)

Article Multidisciplinary Sciences

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

Jellert T. Gaublomme et al.

NATURE COMMUNICATIONS (2019)

Review Neurosciences

Motor Neuron Susceptibility in ALS/FTD

Audrey M. G. Ragagnin et al.

FRONTIERS IN NEUROSCIENCE (2019)

Article Biochemical Research Methods

Fast, sensitive and accurate integration of single-cell data with Harmony

Ilya Korsunsky et al.

NATURE METHODS (2019)

Article Biochemical Research Methods

A test metric for assessing single-cell RNA-seq batch correction

Maren Buettner et al.

NATURE METHODS (2019)

Review Genetics & Heredity

Challenges in unsupervised clustering of single-cell RNA-seq data

Vladimir Yu Kiselev et al.

NATURE REVIEWS GENETICS (2019)

Article Genetics & Heredity

Benchmark and Parameter Sensitivity Analysis of Single-Cell RNA Sequencing Clustering Methods

Monika Krzak et al.

FRONTIERS IN GENETICS (2019)

Article Biotechnology & Applied Microbiology

Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors

Laleh Haghverdi et al.

NATURE BIOTECHNOLOGY (2018)

Article Biotechnology & Applied Microbiology

Integrating single-cell transcriptomic data across different conditions, technologies, and species

Andrew Butler et al.

NATURE BIOTECHNOLOGY (2018)

Article Biochemistry & Molecular Biology

Haploinsufficiency leads to neurodegeneration in C9ORF72 ALS/FTD human induced motor neurons

Yingxiao Shi et al.

NATURE MEDICINE (2018)

Article Biochemistry & Molecular Biology

Modeling sporadic ALS in iPSC-derived motor neurons identifies a potential therapeutic agent

Koki Fujimori et al.

NATURE MEDICINE (2018)

Article Biochemistry & Molecular Biology

Nervous System Regionalization Entails Axial Allocation before Neural Differentiation

Vicki Metzis et al.

Article Mathematical & Computational Biology

Missing data and technical variability in single-cell RNA-sequencing experiments

Stephanie C. Hicks et al.

BIOSTATISTICS (2018)

Article Biochemical Research Methods

Single-cell mRNA quantification and differential analysis with Census

Xiaojie Qiu et al.

NATURE METHODS (2017)

Article Neurosciences

Left-Right Asymmetry of Maturation Rates in Human Embryonic Neural Development

Carolien G. F. de Kovel et al.

BIOLOGICAL PSYCHIATRY (2017)

Review Multidisciplinary Sciences

Decoding ALS: from genes to mechanism

J. Paul Taylor et al.

NATURE (2016)

Article Multidisciplinary Sciences

Efficient Test and Visualization of Multi-Set Intersections

Minghui Wang et al.

SCIENTIFIC REPORTS (2015)

Review Neurosciences

Molecular and cellular development of spinal cord locomotor circuitry

Daniel C. Lu et al.

FRONTIERS IN MOLECULAR NEUROSCIENCE (2015)

Article Cell & Tissue Engineering

Deterministic HOX Patterning in Human Pluripotent Stem Cell-Derived Neuroectoderm

Ethan S. Lippmann et al.

STEM CELL REPORTS (2015)

Article Cell & Tissue Engineering

Pathways Disrupted in Human ALS Motor Neurons Identified through Genetic Correction of Mutant SOD1

Evangelos Kiskinis et al.

CELL STEM CELL (2014)

Review Clinical Neurology

The phenotypic variability of amyotrophic lateral sclerosis

Bart Swinnen et al.

NATURE REVIEWS NEUROLOGY (2014)

Article Biochemical Research Methods

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin et al.

BIOINFORMATICS (2013)

Review Anatomy & Morphology

Hox Genes and Region-Specific Sensorimotor Circuit Formation in the Hindbrain and Spinal Cord

Maria Di Bonito et al.

DEVELOPMENTAL DYNAMICS (2013)

Article Physics, Condensed Matter

A smart local moving algorithm for large-scale modularity-based community detection

Ludo Waltman et al.

EUROPEAN PHYSICAL JOURNAL B (2013)

Article Cell Biology

Targeting RNA Foci in iPSC-Derived Motor Neurons from ALS Patients with a C9ORF72 Repeat Expansion

Dhruv Sareen et al.

SCIENCE TRANSLATIONAL MEDICINE (2013)

Article Biochemical Research Methods

Fiji: an open-source platform for biological-image analysis

Johannes Schindelin et al.

NATURE METHODS (2012)

Editorial Material Biochemistry & Molecular Biology

Snapshot: Spinal Cord Development

William A. Alaynick et al.

Article Neurosciences

Isl1 Is required for multiple aspects of motor neuron development

Xingqun Liang et al.

MOLECULAR AND CELLULAR NEUROSCIENCE (2011)

Article Biochemical Research Methods

Is My Network Module Preserved and Reproducible?

Peter Langfelder et al.

PLOS COMPUTATIONAL BIOLOGY (2011)

Article Clinical Neurology

Pattern of spread and prognosis in lower limb-onset ALS

Martin R. Turner et al.

AMYOTROPHIC LATERAL SCLEROSIS (2010)

Article Biochemistry & Molecular Biology

Sporadic ALS has compartment-specific aberrant exon splicing and altered cell-matrix adhesion biology

Stuart J. Rabin et al.

HUMAN MOLECULAR GENETICS (2010)

Article Multidisciplinary Sciences

Mutations in CHMP2B in Lower Motor Neuron Predominant Amyotrophic Lateral Sclerosis (ALS)

Laura E. Cox et al.

PLOS ONE (2010)

Article Biotechnology & Applied Microbiology

Differential expression analysis for sequence count data

Simon Anders et al.

GENOME BIOLOGY (2010)

Article Biotechnology & Applied Microbiology

Weighted gene co-expression network analysis of the peripheral blood from Amyotrophic Lateral Sclerosis patients

Christiaan G. J. Saris et al.

BMC GENOMICS (2009)

Article Biochemistry & Molecular Biology

Herp enhances ER-associated protein degradation by recruiting ubiquilins

Tae-Yeon Kim et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2008)

News Item Cell & Tissue Engineering

Global transcription in pluripotent embryonic stem cells

Sol Efroni et al.

CELL STEM CELL (2008)

Article Mechanics

Fast unfolding of communities in large networks

Vincent D. Blondel et al.

JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT (2008)

Article Biochemical Research Methods

ROCR: visualizing classifier performance in R

T Sing et al.

BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

A general framework for weighted gene co-expression network analysis

Bin Zhang et al.

STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY (2005)