Related references
Note: Only part of the references are listed.Methoxymethyl Threofuranosyl Thymidine (4′-MOM-TNA-T) at the T7 Position of the Thrombin-Binding Aptamer Boosts Anticoagulation Activity, Thermal Stability, and Nuclease Resistance
Manojkumar Varada et al.
ACS OMEGA (2020)
A structure-activity relationship of a thrombin-binding aptamer containing LNA in novel sites
GuoQing Ying et al.
BIOORGANIC & MEDICINAL CHEMISTRY (2019)
TBA loop mapping with 3′-inverted-deoxythymidine for fine-tuning of the binding affinity for α-thrombin
Zhilong Chai et al.
ORGANIC & BIOMOLECULAR CHEMISTRY (2019)
Aptamer chemistry
Pascal Rothlisberger et al.
ADVANCED DRUG DELIVERY REVIEWS (2018)
Duplex/quadruplex oligonucleotides: Role of the duplex domain in the stabilization of a new generation of highly effective anti-thrombin aptamers
Irene Russo Krauss et al.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2018)
Crystal structures of thrombin in complex with chemically modified thrombin DNA aptamers reveal the origins of enhanced affinity
Rafal Dolot et al.
NUCLEIC ACIDS RESEARCH (2018)
Manipulation of a DNA aptamer-protein binding site through arylation of internal guanine residues
Abigail J. Van Riesen et al.
ORGANIC & BIOMOLECULAR CHEMISTRY (2018)
Novel isoguanine derivative of unlocked nucleic acid-Investigations of thermodynamics and biological potential of modified thrombin binding aptamer
Weronika Kotkowiak et al.
PLOS ONE (2018)
Several structural motifs cooperate in determining the highly effective anti-thrombin activity of NU172 aptamer
Romualdo Troisi et al.
NUCLEIC ACIDS RESEARCH (2018)
Different duplex/quadruplex junctions determine the properties of anti-thrombin aptamers with mixed folding (vol 44, pg 983, 2016)
Irene Russo Krauss et al.
NUCLEIC ACIDS RESEARCH (2016)
Site-specific replacement of the thymine methyl group by fluorine in thrombin binding aptamer significantly improves structural stability and anticoagulant activity
Antonella Virgilio et al.
NUCLEIC ACIDS RESEARCH (2015)
A Universal Base in a Specific Role: Tuning up a Thrombin Aptamer with 5-Nitroindole
Vladimir B. Tsvetkov et al.
SCIENTIFIC REPORTS (2015)
5-Hydroxymethyl-2′-Deoxyuridine Residues in the Thrombin Binding Aptamer: Investigating Anticoagulant Activity by Making a Tiny Chemical Modification
Antonella Virgilio et al.
CHEMBIOCHEM (2014)
Outstanding effects on antithrombin activity of modified TBA diastereomers containing an optically pure acyclic nucleotide analogue
M. Scuotto et al.
ORGANIC & BIOMOLECULAR CHEMISTRY (2014)
Stability and bioactivity of thrombin binding aptamers modified with D-/L-isothymidine in the loop regions
Baobin Cai et al.
ORGANIC & BIOMOLECULAR CHEMISTRY (2014)
Duplex-quadruplex motifs in a peculiar structural organization cooperatively contribute to thrombin binding of a DNA aptamer
Irene Russo Krauss et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2013)
How good are my data and what is the resolution?
Philip R. Evans et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2013)
Dissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer
Andrea Pica et al.
FEBS JOURNAL (2013)
Thrombin Binding Aptamer, More than a Simple Aptamer: Chemically Modified Derivatives and Biomedical Applications
Anna Avino et al.
CURRENT PHARMACEUTICAL DESIGN (2012)
High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity
Irene Russo Krauss et al.
NUCLEIC ACIDS RESEARCH (2012)
Data processing and analysis with the autoPROC toolbox
Clemens Vonrhein et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)
REFMAC5 for the refinement of macromolecular crystal structures
Garib N. Murshudov et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)
Overview of the CCP4 suite and current developments
Martyn D. Winn et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)
Loop residues of thrombin-binding DNA aptamer impact G-quadruplex stability and thrombin binding
Satoru Nagatoishi et al.
BIOCHIMIE (2011)
COCOMAPS: a web application to analyze and visualize contacts at the interface of biomolecular complexes
Anna Vangone et al.
BIOINFORMATICS (2011)
Improved thrombin binding aptamer by incorporation of a single unlocked nucleic acid monomer
Anna Pasternak et al.
NUCLEIC ACIDS RESEARCH (2011)
Thrombin-aptamer recognition: a revealed ambiguity
Irene Russo Krauss et al.
NUCLEIC ACIDS RESEARCH (2011)
XDS
Wolfgang Kabsch
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Features and development of Coot
P. Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
The refined 1.9-Å X-ray crystal structure of d-Phe-Pro-Arg chloromethylketone-inhibited human α-thrombin: Structure analysis, overall structure, electrostatic properties, detailed active-site geometry, and structure-function relationships
Wolfram Bode et al.
PROTEIN SCIENCE (2010)
Inference of macromolecular assemblies from crystalline state
Evgeny Krissinel et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
G-quadruplex induced stabilization by 2'-deoxy-2'-fluoro-D-arabinonucleic acids (2'F-ANA)
Chang Geng Peng et al.
NUCLEIC ACIDS RESEARCH (2007)
Phaser crystallographic software
Airlie J. McCoy et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2007)
Nuclease resistance of telomere-like oligonucleotides monitored in live cells by fluorescence anisotropy imaging
ZH Cao et al.
ANALYTICAL CHEMISTRY (2006)
Scaling and assessment of data quality
P Evans
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2006)
Molecular recognition mechanisms of thrombin
JA Huntington
JOURNAL OF THROMBOSIS AND HAEMOSTASIS (2005)
Crystal structure of the complex between thrombin and the central E region of fibrin
I Pechik et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
E Krissinel et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)