4.8 Article

Epigenome-wide meta-analysis of PTSD across 10 military and civilian cohorts identifies methylation changes in AHRR

Journal

NATURE COMMUNICATIONS
Volume 11, Issue 1, Pages -

Publisher

NATURE PORTFOLIO
DOI: 10.1038/s41467-020-19615-x

Keywords

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Funding

  1. U.S. Army Medical Research and Materiel Command
  2. National Institute of Mental Health (NIMH) [R01MH108826, R01MH106595]
  3. Biomedical and Laboratory Research and Development [I01BX002577]
  4. National Institutes of Mental Health [MH096764, MH071537]
  5. NIH [R01DA022720, R01DA022720-S1, RC1MH088283, R01MH093500]
  6. Marine Corps, Navy Bureau of Medicine and Surgery (BUMED)
  7. VA Health Research and Development (HSRD)
  8. UCSD Christini Fund
  9. Dutch Ministry of Defense
  10. VENI Award fellowship from the Netherlands Organization for Scientific Research (NWO) [916.11.086]
  11. National Institute of Mental Health [RO1MH079806]
  12. Department of Veterans Affairs, Clinical Science Research & Development Program [5I01CX000431-02]
  13. Department of Veterans Affairs, Biomedical Laboratory Research & Development Program [1I01BX002150-01]
  14. Department of Veterans Affairs, Clinical Sciences Research, and Development Program
  15. Clinical Science Research and Development (CSRD) [IK2CX000525]
  16. CSR&D Service of VA ORD [11S-RCS-009]
  17. Biomedical Laboratory Research and Development (BLR&D) Service of VA ORD [I01BX002577]
  18. Department of the Army
  19. National Institutes of Health, National Institute of Mental Health (NIH/NIMH) [U01MH087981]
  20. CDC/NIOSH [U01 OH010416-01]
  21. United States Department of Defense [W81XWH08-2-0159]

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Epigenetic differences may help to distinguish between PTSD cases and trauma-exposed controls. Here, we describe the results of the largest DNA methylation meta-analysis of PTSD to date. Ten cohorts, military and civilian, contribute blood-derived DNA methylation data from 1,896 PTSD cases and trauma-exposed controls. Four CpG sites within the aryl-hydrocarbon receptor repressor (AHRR) associate with PTSD after adjustment for multiple comparisons, with lower DNA methylation in PTSD cases relative to controls. Although AHRR methylation is known to associate with smoking, the AHRR association with PTSD is most pronounced in non-smokers, suggesting the result was independent of smoking status. Evaluation of metabolomics data reveals that AHRR methylation associated with kynurenine levels, which are lower among subjects with PTSD. This study supports epigenetic differences in those with PTSD and suggests a role for decreased kynurenine as a contributor to immune dysregulation in PTSD. PTSD has been associated with DNA methylation of specific loci in the genome, but studies have been limited by small sample sizes. Here, the authors perform a meta-analysis of DNA methylation data from 10 different cohorts and identify CpGs in AHRR that are associated with PTSD.

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