4.8 Article

Disposable silicon-based all-in-one micro-qPCR for apid on-site detection of pathogens

Journal

NATURE COMMUNICATIONS
Volume 11, Issue 1, Pages -

Publisher

NATURE RESEARCH
DOI: 10.1038/s41467-020-19911-6

Keywords

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Funding

  1. Wellcome Trust [207687/Z/17/Z]
  2. UK Engineering and Physical Sciences Research Council (EPSRC) [EP/ R010242/1]
  3. Imperial College, Department of Bioengineering
  4. Scottish Government Rural and Environment Science and Analytical Services
  5. EPSRC DTP [1846144]
  6. BBSRC DTP [2177734]
  7. BBSRC [2177734] Funding Source: UKRI
  8. Wellcome Trust [207687/Z/17/Z] Funding Source: Wellcome Trust

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Rapid screening and low-cost diagnosis play a crucial role in choosing the correct course of intervention when dealing with highly infectious pathogens. This is especially important if the disease-causing agent has no effective treatment, such as the novel coronavirus SARS-CoV-2, and shows no or similar symptoms to other common infections. Here, we report a disposable silicon-based integrated Point-of-Need transducer (TriSilix) for real-time quantitative detection of pathogen-specific sequences of nucleic acids. TriSilix can be produced at wafer-scale in a standard laboratory (37 chips of 10x10x0.65mm in size can be produced in 7h, costing similar to 0.35 USD per device). We are able to quantitatively detect a 563bp fragment of genomic DNA of Mycobacterium avium subspecies paratuberculosis through real-time PCR with a limit-of-detection of 20fg, equivalent to a single bacterium, at the 35(th) cycle. Using TriSilix, we also detect the cDNA from SARS-CoV-2 (1pg) with high specificity against SARS-CoV (2003).

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