4.3 Article

Structural basis of mutants of PET-degrading enzyme from Saccharomonospora viridis AHK190 with high activity and thermal stability

Journal

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume 89, Issue 5, Pages 502-511

Publisher

WILEY
DOI: 10.1002/prot.26034

Keywords

crystal structure; disulfide bond; enzymatic activity; metal binding; thermal stability

Funding

  1. Japan Society for the Promotion of Science [JP20H03229, JP20K15758]

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The study demonstrated that Cut190*SS increased thermal stability while maintaining enzymatic function, attributed to the formation of a disulfide bond by Cys250 and Cys296. Results indicated that although the metal-binding properties of Cut190*SS series differed, the enzyme retained its ability to utilize Ca2+ to accelerate conformational change, thereby preserving its functionality.
The cutinase-like enzyme from the thermophile Saccharomonospora viridis AHK190, Cut190, is a good candidate to depolymerize polyethylene terephthalate (PET) efficiently. We previously developed a mutant of Cut190 (S226P/R228S), which we designated as Cut190* that has both increased activity and stability and solved its crystal structure. Recently, we showed that mutation of D250C/E296C on one of the Ca2+-binding sites resulted in a higher thermal stability while retaining its polyesterase activity. In this study, we solved the crystal structures of Cut190* mutants, Q138A/D250C-E296C/Q123H/N202H, designated as Cut190*SS, and its inactive S176A mutant, Cut190*SS_S176A, at high resolution. The overall structures were similar to those of Cut190* and Cut190*S176A reported previously. As expected, Cys250 and Cys296 were closely located to form a disulfide bond, which would assuredly contribute to increase the stability. Isothermal titration calorimetry experiments and 3D Reference Interaction Site Model calculations showed that the metal-binding properties of the Cut190*SS series were different from those of the Cut190* series. However, our results show that binding of Ca2+ to the weak binding site, site 1, would be retained, enabling Cut190*SS to keep its ability to use Ca2+ to accelerate the conformational change from the closed (inactive) to the open (active) form. While increasing the thermal stability, Cut190*SS could still express its enzymatic function. Even after incubation at 70 degrees C, which corresponds to the glass transition temperature of PET, the enzyme retained its activity well, implying a high applicability for industrial PET depolymerization using Cut190*SS.

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