4.6 Article

GroupRegNet: a groupwise one-shot deep learning-based 4D image registration method

Journal

PHYSICS IN MEDICINE AND BIOLOGY
Volume 66, Issue 4, Pages -

Publisher

IOP Publishing Ltd
DOI: 10.1088/1361-6560/abd956

Keywords

deformable image registration; 4D-CT; deep learning

Funding

  1. Agency for Healthcare Research and Quality (AHRQ) [R01-HS022888]
  2. National Institute of Biomedical Imaging and Bioengineering (NIBIB) [R03-EB028427]
  3. National Heart, Lung, and Blood Institute (NHLBI) [R01-HL148210]

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GroupRegNet is a new method for deformable four-dimensional medical image registration, which obtains deformation fields through one-shot learning to warp all images into a common template, addressing bias and accumulated error issues. Compared to the latest deep learning-based methods, GroupRegNet features a simpler network design and a more straightforward registration process.
Accurate deformable four-dimensional (4D) (three-dimensional in space and time) medical images registration is essential in a variety of medical applications. Deep learning-based methods have recently gained popularity in this area for the significantly lower inference time. However, they suffer from drawbacks of non-optimal accuracy and the requirement of a large amount of training data. A new method named GroupRegNet is proposed to address both limitations. The deformation fields to warp all images in the group into a common template is obtained through one-shot learning. The use of the implicit template reduces bias and accumulated error associated with the specified reference image. The one-shot learning strategy is similar to the conventional iterative optimization method but the motion model and parameters are replaced with a convolutional neural network and the weights of the network. GroupRegNet also features a simpler network design and a more straightforward registration process, which eliminates the need to break up the input image into patches. The proposed method was quantitatively evaluated on two public respiratory-binned 4D-computed tomography datasets. The results suggest that GroupRegNet outperforms the latest published deep learning-based methods and is comparable to the top conventional method pTVreg. To facilitate future research, the source code is available at https://github.com/vincentme/GroupRegNet.

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