Related references
Note: Only part of the references are listed.Ascoma genotyping and mating type analyses of mycorrhizas and soil mycelia of Tuber borchii in a truffle orchard established by mycelial inoculated plants
Pamela Leonardi et al.
ENVIRONMENTAL MICROBIOLOGY (2020)
At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions
Francesco Venice et al.
ENVIRONMENTAL MICROBIOLOGY (2020)
The small secreted effector protein MiSSP7.6 of Laccaria bicolor is required for the establishment of ectomycorrhizal symbiosis
Heng Kang et al.
ENVIRONMENTAL MICROBIOLOGY (2020)
Spring stomatal response to vapor pressure deficit as a marker for desert truffle fruiting
Jose Eduardo Marques-Galvez et al.
MYCORRHIZA (2020)
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
Shingo Miyauchi et al.
NATURE COMMUNICATIONS (2020)
Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus
Shingo Miyauchi et al.
DNA RESEARCH (2020)
ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
Emmanuel Paradis et al.
BIOINFORMATICS (2019)
Identification and assessment of variable single-copy orthologous (SCO) nuclear loci for low-level phylogenomics: a case study in the genus Rosa (Rosaceae)
Kevin Debray et al.
BMC EVOLUTIONARY BIOLOGY (2019)
Purification and characterization of Terfezia claveryi TcCAT-1, a desert truffle catalase upregulated in mycorrhizal symbiosis
Jose Eduardo Marques-Galvez et al.
PLOS ONE (2019)
Orchard Conditions and Fruiting Body Characteristics Drive the Microbiome of the Black Truffle Tuber aestivum
Richard Splivallo et al.
FRONTIERS IN MICROBIOLOGY (2019)
Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina
Emmanuelle Morin et al.
NEW PHYTOLOGIST (2019)
Genome and evolution of the arbuscular mycorrhizal fungus Diversispora epigaea (formerly Glomus versiforme) and its bacterial endosymbionts
Xuepeng Sun et al.
NEW PHYTOLOGIST (2019)
OrthoFinder: phylogenetic orthology inference for comparative genomics
David M. Emms et al.
GENOME BIOLOGY (2019)
The Role of Auxin in Cell Wall Expansion
Mateusz Majda et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2018)
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2018)
Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists
Elena Martino et al.
NEW PHYTOLOGIST (2018)
High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis
Eric C. H. Chen et al.
NEW PHYTOLOGIST (2018)
Phosphorus concentration coordinates a respiratory bypass, synthesis and exudation of citrate, and the expression of high-affinity phosphorus transporters in Solanum lycopersicum
Nestor Fernandez Del-Saz et al.
PLANT CELL AND ENVIRONMENT (2018)
Out of Shape During Stress: A Key Role for Auxin
Ruud A. Korver et al.
TRENDS IN PLANT SCIENCE (2018)
Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
Shingo Miyauchi et al.
BIOTECHNOLOGY FOR BIOFUELS (2018)
Mycelium of Terfezia claveryi as inoculum source to produce desert truffle mycorrhizal plants
Francisco Arenas et al.
MYCORRHIZA (2018)
Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle
Claude Murat et al.
NATURE ECOLOGY & EVOLUTION (2018)
GGTREE: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
Guangchuang Yu et al.
METHODS IN ECOLOGY AND EVOLUTION (2017)
Nutrient Exchange and Regulation in Arbuscular Mycorrhizal Symbiosis
Wanxiao Wang et al.
MOLECULAR PLANT (2017)
ModelFinder: fast model selection for accurate phylogenetic estimates
Subha Kalyaanamoorthy et al.
NATURE METHODS (2017)
The integrative omics of white-rot fungus Pycnoporus coccineus reveals co-regulated CAZymes for orchestrated lignocellulose breakdown
Shingo Miyauchi et al.
PLOS ONE (2017)
Fine-scale genetic structure of natural Tuber aestivum sites in southern Germany
Virginie Molinier et al.
MYCORRHIZA (2016)
Visual Comparative Omics of Fungi for Plant Biomass Deconstruction
Shingo Miyauchi et al.
FRONTIERS IN MICROBIOLOGY (2016)
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
Dinghua Li et al.
BIOINFORMATICS (2015)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
Annegret Kohler et al.
NATURE GENETICS (2015)
Arbuscular mycorrhizal dialogues: do you speak 'plantish' or 'fungish?
Paola Bonfante et al.
TRENDS IN PLANT SCIENCE (2015)
Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins
Clement Pellegrin et al.
FRONTIERS IN MICROBIOLOGY (2015)
Different respiration metabolism between mycorrhizal and non-mycorrhizal rice under low-temperature stress: a cry for help from the host
Z. Liu et al.
JOURNAL OF AGRICULTURAL SCIENCE (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Fast and sensitive protein alignment using DIAMOND
Benjamin Buchfink et al.
NATURE METHODS (2015)
Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment
Claire Veneault-Fourrey et al.
FUNGAL GENETICS AND BIOLOGY (2014)
Impact of the competition between mating types on the cultivation of Tuber melanosporum: Romeo and Juliet and the matter of space and time
Andrea Rubini et al.
MYCORRHIZA (2014)
Climatic variations explain annual fluctuations in French P,rigord black truffle wholesale markets but do not explain the decrease in black truffle production over the last 48 years
Francois Le Tacon et al.
MYCORRHIZA (2014)
PATRIC, the bacterial bioinformatics database and analysis resource
Alice R. Wattam et al.
NUCLEIC ACIDS RESEARCH (2014)
MycoCosm portal: gearing up for 1000 fungal genomes
Igor V. Grigoriev et al.
NUCLEIC ACIDS RESEARCH (2014)
Effector MiSSP7 of the mutualistic fungus Laccaria bicolor stabilizes the Populus JAZ6 protein and represses jasmonic acid (JA) responsive genes
Jonathan M. Plett et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
Alternative Oxidase: A Mitochondrial Respiratory Pathway to Maintain Metabolic and Signaling Homeostasis during Abiotic and Biotic Stress in Plants
Greg C. Vanlerberghe
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2013)
Fine-scale spatial genetic structure of the black truffle (Tuber melanosporum) investigated with neutral microsatellites and functional mating type genes
Claude Murat et al.
NEW PHYTOLOGIST (2013)
Estimating Gene Gain and Loss Rates in the Presence of Error in Genome Assembly and Annotation Using CAFE 3
Mira V. Han et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Expression Analysis of Aquaporins from Desert Truffle Mycorrhizal Symbiosis Reveals a Fine-Tuned Regulation Under Drought
Alfonso Navarro-Rodenas et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2013)
Unravelling mitochondrial retrograde regulation in the abiotic stress induction of rice ALTERNATIVE OXIDASE 1 genes
Chun-Rong Li et al.
PLANT CELL AND ENVIRONMENT (2013)
Historical Biogeography and Diversification of Truffles in the Tuberaceae and Their Newly Identified Southern Hemisphere Sister Lineage
Gregory Bonito et al.
PLOS ONE (2013)
Dating the Diversification of the Major Lineages of Ascomycota (Fungi)
Maria Prieto et al.
PLOS ONE (2013)
Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
Emilie Tisserant et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Genetic Diversity and Mating Type Distribution of Tuber melanosporum and Their Significance to Truffle Cultivation in Artificially Planted Truffieres in Australia
C. C. Linde et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
The detection of mating type genes of Tuber melanosporum in productive and non productive soils
Elisa Zampieri et al.
APPLIED SOIL ECOLOGY (2012)
The role of phosphorus in the ectendomycorrhiza continuum of desert truffle mycorrhizal plants
Alfonso Navarro-Rodenas et al.
MYCORRHIZA (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
A Secreted Effector Protein of Laccaria bicolor Is Required for Symbiosis Development
Jonathan M. Plett et al.
CURRENT BIOLOGY (2011)
Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica
Alga Zuccaro et al.
PLOS PATHOGENS (2011)
Perigord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis
Francis Martin et al.
NATURE (2010)
The superfamily of thaumatin-like proteins: its origin, evolution, and expression towards biological function
Jun-Jun Liu et al.
PLANT CELL REPORTS (2010)
Physiological parameters of desert truffle mycorrhizal Helianthemun almeriense plants cultivated in orchards under water deficit conditions
Asuncion Morte et al.
SYMBIOSIS (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
PAML 4: Phylogenetic analysis by maximum likelihood
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Involvement of reactive oxygen species during early stages of ectomycorrhiza establishment between Castanea sativa and Pisolithus tinctorius
Paula Baptista et al.
MYCORRHIZA (2007)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
Analysis of mycorrhizal associations formed by Cistus incanus transformed root clones with Terfezia boudieri isolates
M Zaretsky et al.
PLANT CELL REPORTS (2006)
Differential expression of fungal genes at preinfection and mycorrhiza establishment between Terfezia boudieri isolates and Cistus incanus hairy root clones
Marianna Zaretsky et al.
NEW PHYTOLOGIST (2006)
Homokaryotic and heterokaryotic hyphae in Terfezia
N Roth-Bejerano et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2004)
Morphological characterization of the mycorrhiza formed by Helianthemum almeriense Pau with Terfezia claveryi Chatin and Picoa lefebvrei (Pat.) Maire
A Gutiérrez et al.
MYCORRHIZA (2003)
Intra- and interspecific variation in DNA content in Cistus (Cistaceae)
P Ellul et al.
ANNALS OF BOTANY (2002)
An efficient algorithm for large-scale detection of protein families
AJ Enright et al.
NUCLEIC ACIDS RESEARCH (2002)
Ectendomycorrhizal associations - characteristics and functions
TEJC Yu et al.
MYCORRHIZA (2001)
Effect of drought stress on growth and water relations of the mycorrhizal association Helianthemum almeriense-Terfezia claveryi
A Morte et al.
MYCORRHIZA (2000)
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
J Castresana
MOLECULAR BIOLOGY AND EVOLUTION (2000)
Molecular basis of symbiotic promiscuity
X Perret et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2000)