Related references
Note: Only part of the references are listed.Emergent climate change impact throughout the world: call for Microbiome Conservation before it's too late
Aparna Banerjee et al.
BIODIVERSITY AND CONSERVATION (2020)
The planktonic protist interactome: where do we stand after a century of research?
Marit F. Markussen Bjorbaekmo et al.
ISME JOURNAL (2020)
Environmental DNA reveals seasonal shifts and potential interactions in a marine community
Anni Djurhuus et al.
NATURE COMMUNICATIONS (2020)
Co-occurrence is not evidence of ecological interactions
F. Guillaume Blanchet et al.
ECOLOGY LETTERS (2020)
Factors shaping community patterns of protists and bacteria on a European scale
Christina Bock et al.
ENVIRONMENTAL MICROBIOLOGY (2020)
Co-occurrence Networks Among Bacteria and Microbial Eukaryotes of Lake Baikal During a Spring Phytoplankton Bloom
Ivan S. Mikhailov et al.
MICROBIAL ECOLOGY (2019)
Importance of ciliates as food for fish larvae in a shallow sea bay and a large shallow lake
Priit Zingel et al.
EUROPEAN JOURNAL OF PROTISTOLOGY (2019)
Seasonality of Planktonic Freshwater Ciliates: Are Analyses Based on V9 Regions of the 18S rRNA Gene Correlated With Morphospecies Counts?
Gianna Pitsch et al.
FRONTIERS IN MICROBIOLOGY (2019)
Improving eDNA-based protist diversity assessments using networks of amplicon sequence variants
Dominik Forster et al.
ENVIRONMENTAL MICROBIOLOGY (2019)
Use and abuse of correlation analyses in microbial ecology
Alex Carr et al.
ISME JOURNAL (2019)
Microbial food webs in hypertrophic fishponds: Omnivorous ciliate taxa are major protistan bacterivores
Karel Simek et al.
LIMNOLOGY AND OCEANOGRAPHY (2019)
Spatial and temporal dynamics of a freshwater eukaryotic plankton community revealed via 18S rRNA gene metabarcoding
A. Banerji et al.
HYDROBIOLOGIA (2018)
Molecular analyses of protists in long-term observation programmes-current status and future perspectives
Rowena Stern et al.
JOURNAL OF PLANKTON RESEARCH (2018)
From hairballs to hypotheses-biological insights from microbial networks
Lisa Rottjers et al.
FEMS MICROBIOLOGY REVIEWS (2018)
Molecular diversity of plankton in a tropical crater lake switching from hyposaline to subsaline conditions: Lake Oloidien, Kenya
Wei Luo et al.
HYDROBIOLOGIA (2017)
Microbial diversity and ecological networks as indicators of environmental quality
Battle Karimi et al.
ENVIRONMENTAL CHEMISTRY LETTERS (2017)
Functional diversity of aquatic ciliates
Thomas Weisse
EUROPEAN JOURNAL OF PROTISTOLOGY (2017)
From dimictic to monomictic: Empirical evidence of thermal regime transitions in three deep alpine lakes in Austria induced by climate change
Harald Ficker et al.
FRESHWATER BIOLOGY (2017)
Using null models to infer microbial co-occurrence networks
Nora Connor et al.
PLOS ONE (2017)
Soil networks become more connected and take up more carbon as nature restoration progresses
Elly Morrien et al.
NATURE COMMUNICATIONS (2017)
Abrupt stop of deep water turnover with lake warming: Drastic consequences for algal primary producers
Yana Yankova et al.
SCIENTIFIC REPORTS (2017)
Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data
Didier Debroas et al.
FEMS MICROBIOLOGY ECOLOGY (2017)
Large biomass of small feeders: ciliates may dominate herbivory in eutrophic lakes
Betty Lischke et al.
JOURNAL OF PLANKTON RESEARCH (2016)
The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages
Shengjing Shi et al.
ECOLOGY LETTERS (2016)
Prolongation, deepening and warming of the metalimnion change habitat conditions of the harmful filamentous cyanobacterium Planktothrix rubescens in a prealpine lake
Yana Yankova et al.
HYDROBIOLOGIA (2016)
Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China
Bin Ma et al.
ISME JOURNAL (2016)
Correlation detection strategies in microbial data sets vary widely in sensitivity and precision
Sophie Weiss et al.
ISME JOURNAL (2016)
Universal resilience patterns in complex networks
Jianxi Gao et al.
NATURE (2016)
Plankton networks driving carbon export in the oligotrophic ocean
Lionel Guidi et al.
NATURE (2016)
Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes
Miklos Balint et al.
FEMS MICROBIOLOGY REVIEWS (2016)
Marine microbial community dynamics and their ecological interpretation
Jed A. Fuhrman et al.
NATURE REVIEWS MICROBIOLOGY (2015)
Determinants of community structure in the global plankton interactome
Gipsi Lima-Mendez et al.
SCIENCE (2015)
Network of Interactions Between Ciliates and Phytoplankton During Spring
Thomas Posch et al.
FRONTIERS IN MICROBIOLOGY (2015)
Cross-biome comparison of microbial association networks
Karoline Faust et al.
FRONTIERS IN MICROBIOLOGY (2015)
Swarm v2: highly-scalable and high-resolution amplicon clustering
Frederic Mahe et al.
PEERJ (2015)
Long-term changes in hypoxia and soluble reactive phosphorus in the hypolimnion of a large temperate lake: consequences of a climate regime shift
Ryan P. North et al.
GLOBAL CHANGE BIOLOGY (2014)
Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists
Cheryl-Emiliane T. Chow et al.
ISME JOURNAL (2014)
A finely tuned symphony of factors modulates the microbial food web of a freshwater reservoir in spring
Karel Simek et al.
LIMNOLOGY AND OCEANOGRAPHY (2014)
Deciphering microbial interactions and detecting keystone species with co-occurrence networks
David Berry et al.
FRONTIERS IN MICROBIOLOGY (2014)
Network topology reveals high connectance levels and few key microbial genera within soils
Manoeli Lupatini et al.
FRONTIERS IN ENVIRONMENTAL SCIENCE (2014)
Life in the Plastisphere: Microbial Communities on Plastic Marine Debris
Erik R. Zettler et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2013)
Diversity of protists and bacteria determines predation performance and stability
Muhammad Saleem et al.
ISME JOURNAL (2013)
Beyond the Plankton Ecology Group (PEG) Model: Mechanisms Driving Plankton Succession
Ulrich Sommer et al.
ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 43 (2012)
Impacts of climate change on the future of biodiversity
Celine Bellard et al.
ECOLOGY LETTERS (2012)
Long-term changes in oxygen depletion in a small temperate lake: effects of climate change and eutrophication
Brian Foley et al.
FRESHWATER BIOLOGY (2012)
Phytoplankton response to a changing climate
Monika Winder et al.
HYDROBIOLOGIA (2012)
Defining seasonal marine microbial community dynamics
Jack A. Gilbert et al.
ISME JOURNAL (2012)
Using network analysis to explore co-occurrence patterns in soil microbial communities
Albert Barberan et al.
ISME JOURNAL (2012)
Coherent dynamics and association networks among lake bacterioplankton taxa
Alexander Eiler et al.
ISME JOURNAL (2012)
Ciliates as the crucial food source of larval fish in a shallow eutrophic lake
Priit Zingel et al.
LIMNOLOGY AND OCEANOGRAPHY (2012)
Microbial interactions: from networks to models
Karoline Faust et al.
NATURE REVIEWS MICROBIOLOGY (2012)
Predator richness increases the effect of prey diversity on prey yield
Muhammad Saleem et al.
NATURE COMMUNICATIONS (2012)
Harmful filamentous cyanobacteria favoured by reduced water turnover with lake warming
Thomas Posch et al.
NATURE CLIMATE CHANGE (2012)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Using species co-occurrence networks to assess the impacts of climate change
Miguel B. Araujo et al.
ECOGRAPHY (2011)
Marine bacterial, archaeal and protistan association networks reveal ecological linkages
Joshua A. Steele et al.
ISME JOURNAL (2011)
Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2
Jizhong Zhou et al.
MBIO (2011)
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
T. Stoeck et al.
MOLECULAR ECOLOGY (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
New multidimensional functional diversity indices for a multifaceted framework in functional ecology
Sebastien Villeger et al.
ECOLOGY (2008)
Role of productivity and protozoan abundance for the occurrence of predation-resistant bacteria in aquatic systems
Johanna Thelaus et al.
MICROBIAL ECOLOGY (2008)
Ciliates are the dominant grazers on pico- and nanoplankton in a shallow, naturally highly eutrophic lake
Priit Zingel et al.
MICROBIAL ECOLOGY (2007)
Twenty years of spatially coherent deepwater warming in lakes across Europe related to the North Atlantic Oscillation
Martin T. Dokulil et al.
LIMNOLOGY AND OCEANOGRAPHY (2006)
Biodiversity and ecosystem stability in a decade-long grassland experiment
David Tilman et al.
NATURE (2006)
Freshwater ciliates as ecophysiological model organisms - lessons from Daphnia, major achievements, and future perspectives
Thomas Weisse
ARCHIV FUR HYDROBIOLOGIE (2006)
Do phytoplankton communities correctly track trophic changes? An assessment using directly measured and palaeolimnological data
MT Dokulil et al.
FRESHWATER BIOLOGY (2005)
Network thinking in ecology and evolution
SR Proulx et al.
TRENDS IN ECOLOGY & EVOLUTION (2005)
The growing contributions of molecular biology and immunology to protistan ecology: Molecular signatures as ecological tools
DA Caron et al.
JOURNAL OF EUKARYOTIC MICROBIOLOGY (2004)
Impact of secular climate change on the thermal structure of a large temperate central European lake
DM Livingstone
CLIMATIC CHANGE (2003)
Seasonal dynamics of cyst formation of strombidiid ciliates in alpine Lake Mondsee, Austria
H Müller et al.
AQUATIC MICROBIAL ECOLOGY (2002)
Network structure and biodiversity loss in food webs: robustness increases with connectance
JA Dunne et al.
ECOLOGY LETTERS (2002)
Niche separation in common prostome freshwater ciliates:: the effect of food and temperature
T Weisse et al.
AQUATIC MICROBIAL ECOLOGY (2001)
Limnological description of the Lakes Zurich, Lucerne, and Cadagno
P Bossard et al.
AQUATIC SCIENCES (2001)
Error and attack tolerance of complex networks
R Albert et al.
NATURE (2000)