Journal
MEDICAL PHYSICS
Volume 48, Issue 2, Pages 902-911Publisher
WILEY
DOI: 10.1002/mp.14594
Keywords
CT projection data; iterative reconstruction; low dose CT; machine learning; patient data
Funding
- National Institutes of Health [R01 EB017095, U01 EB017185]
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This dataset consists of CT images and projection data from patient exams at routine clinical doses and simulated lower doses. Collected under local ethics committee approval, it includes data from 299 patient CT exams of three types. The library allows for development and validation of new CT reconstruction and denoising algorithms.
Purpose To describe a large, publicly available dataset comprising computed tomography (CT) images and projection data from patient exams at routine clinical doses and simulated lower doses. Acquisition and validation methods The library was developed under local ethics committee approval. Projection and image data from 299 clinically performed patient CT exams were archived for three types of clinical exams: noncontrast head CT scans acquired for acute cognitive or motor deficit, low-dose noncontrast chest scans acquired to screen high-risk patients for pulmonary nodules, and contrast-enhanced CT scans of the abdomen acquired to look for metastatic liver lesions. Scans were performed on CT systems from two different CT manufacturers using routine clinical protocols. Projection data were validated by reconstructing the data using several different reconstruction algorithms and through use of the data in the 2016 Low Dose CT Grand Challenge. Reduced dose projection data were simulated for each scan using a validated noise insertion method. Radiologists marked location and diagnosis for detected pathologies. Reference truth was obtained from the patient medical record, either from histology or subsequent imaging. Data format and usage notes Projection datasets were converted into the previously developed DICOM-CT-PD format, which is an extended DICOM format created to store CT projections and acquisition geometry in a nonproprietary format. Image data are stored in the standard DICOM image format and clinical data in a spreadsheet. Materials are provided to help investigators use the DICOM-CT-PD files, including a dictionary file, data reader and user manual. The library is publicly available from The Cancer Imaging Archive (). Potential applications This CT data library will facilitate the development and validation of new CT reconstruction and/or denoising algorithms, including those associated with machine learning or artificial intelligence. The provided clinical information allows evaluation of task-based diagnostic performance.
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