Related references
Note: Only part of the references are listed.Full-Featured, Real-Time Database Searching Platform Enables Fast and Accurate Multiplexed Quantitative Proteomics
Devin K. Schweppe et al.
JOURNAL OF PROTEOME RESEARCH (2020)
TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples
Jiaming Li et al.
NATURE METHODS (2020)
Characterization and Optimization of Multiplexed Quantitative Analyses Using High-Field Asymmetric-Waveform Ion Mobility Mass Spectrometry
Devin K. Schweppe et al.
ANALYTICAL CHEMISTRY (2019)
Improved Precursor Characterization for Data-Dependent Mass Spectrometry
Alexander S. Hebert et al.
ANALYTICAL CHEMISTRY (2018)
Extracting Accurate Precursor Information for Tandem Mass Spectra by Raw Converter
Lin He et al.
ANALYTICAL CHEMISTRY (2015)
DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics
Chih-Chiang Tsou et al.
NATURE METHODS (2015)
Comet: An open-source MS/MS sequence database search tool
Jimmy K. Eng et al.
PROTEOMICS (2013)
A cross-platform toolkit for mass spectrometry and proteomics
Matthew C. Chambers et al.
NATURE BIOTECHNOLOGY (2012)
pParse: A method for accurate determination of monoisotopic peaks in high-resolution mass spectra
Zuo-Fei Yuan et al.
PROTEOMICS (2012)
A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression
Edward L. Huttlin et al.
CELL (2010)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
High-speed data reduction, feature detection and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass Spectrometry
Michael R. Hoopmann et al.
ANALYTICAL CHEMISTRY (2007)
MS1, MS2, and SQT - three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications
WH McDonald et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2004)
A common open representation of mass spectrometry data and its application to proteomics research
PGA Pedrioli et al.
NATURE BIOTECHNOLOGY (2004)