4.6 Article

On the Accuracy of the Direct Method to Calculate pKa from Electronic Structure Calculations

Journal

JOURNAL OF PHYSICAL CHEMISTRY A
Volume 125, Issue 1, Pages 65-73

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/acs.jpca.0c08283

Keywords

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Funding

  1. Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP - Center for Computational Engineering and Sciences) [2013/08293-7, 2017/11485-6]
  2. Fundo de Apoio ao Ensino, a Pesquisa e a Extensao da UNICAMP (FAEPEX-UNICAMP)
  3. Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior - Brasil (CAPES) [001]

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The study investigated a direct method for calculating the pK(a) values of monoprotic acids, which involves adjusting the proton free energy in solution based on experimental pK(a) data. The G4CEP method showed the best performance under various conditions, with a mean absolute error close to 0.5 units of pK(a) and an uncertainty around +/- 1 unit of pK(a) for any training set.
The direct method (HA((soln)) reversible arrow A((soln))(-) + H-(so(ln))+) for calculating pK(a) of monoprotic acids is as efficient as thermodynamic cycles. A selective adjustment of proton free energy in solution was used with experimental pK(a) data. The procedure was analyzed at different levels of theory. The solvent was described by the solvation model density (SMD) model, including or not explicit water molecules, and three training sets were tested. The best performance under any condition was obtained by the G4CEP method with a mean absolute error close to 0.5 units of pK(a) and an uncertainty around +/- 1 unit of pK(a) for any training set including or excluding explicit solvent molecules. PM6 and AM1 performed very well with average absolute errors below 0.75 units of pK(a) but with uncertainties up to +/- 2 units of pK(a,) using only the SMD solvent model. Density functional theory (DFT) results were highly dependent on the basis functions and explicit water molecules. The best performance was observed for the local spin density approximation (LSDA) functional in almost all calculations and under certain conditions, as high as those obtained by G4CEP. Basis set complexity and explicit solvent molecules were important factors to control DFT calculations. The training set molecules should consider the diversity of compounds.

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