Related references
Note: Only part of the references are listed.Computational prediction of protein-protein binding affinities
Till Siebenmorgen et al.
WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE (2020)
Oligomers Are Promising Targets for Drug Development in the Treatment of Proteinopathies
Oxana Galzitskaya
FRONTIERS IN MOLECULAR NEUROSCIENCE (2020)
Ultrasonic waves effect on S-shaped β-amyloids conformational dynamics by non-equilibrium molecular dynamics
Marcello Miceli et al.
JOURNAL OF MOLECULAR GRAPHICS & MODELLING (2020)
On the Conformational Dynamics of β-Amyloid Forming Peptides: A Computational Perspective
Konda Mani Saravanan et al.
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY (2020)
Molecular simulations of amyloid beta assemblies
Gianvito Grasso et al.
ADVANCES IN PHYSICS-X (2020)
End-Point Binding Free Energy Calculation with MM/PBSA and MM/GBSA: Strategies and Applications in Drug Design
Ercheng Wang et al.
CHEMICAL REVIEWS (2019)
Conformational Dynamics and Stability of U-Shaped and S-Shaped Amyloid β Assemblies
Gianvito Grasso et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2018)
To Be Fibrils or To Be Nanofilms? Oligomers Are Building Blocks for Fibril and Nanofilm Formation of Fragments of Aβ Peptide
Olga M. Selivanova et al.
LANGMUIR (2018)
Rosetta Stone for Amyloid Fibrils: The Key Role of Ring-Like Oligomers in Amyloidogenesis
Oxana V. Galzitskaya et al.
JOURNAL OF ALZHEIMERS DISEASE (2017)
Intracellular protein degradation: From a vague idea thru the lysosome and the ubiquitin-proteasome system and onto human diseases and drug targeting
Aaron Ciechanover
BEST PRACTICE & RESEARCH CLINICAL HAEMATOLOGY (2017)
The Mechanism Underlying Amyloid Polymorphism is Opened for Alzheimer's Disease Amyloid-β Peptide
Olga M. Selivanova et al.
JOURNAL OF ALZHEIMERS DISEASE (2016)
Comparison of radii sets, entropy, QM methods, and sampling on MM-PBSA, MM-GBSA, and QM/MM-GBSA ligand binding energies of F-tularensis enoyl-ACP reductase (FabI)
Pin-Chih Su et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2015)
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures
Barbora Kozlikova et al.
BIOINFORMATICS (2014)
PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
Daniel R. Roe et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2013)
Protein and ligand preparation: parameters, protocols, and influence on virtual screening enrichments
G. Madhavi Sastry et al.
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN (2013)
Brain Imaging in Alzheimer Disease
Keith A. Johnson et al.
COLD SPRING HARBOR PERSPECTIVES IN MEDICINE (2012)
ProDy: Protein Dynamics Inferred from Theory and Experiments
Ahmet Bakan et al.
BIOINFORMATICS (2011)
Analyzing and visualizing residue networks of protein structures
Nadezhda T. Doncheva et al.
TRENDS IN BIOCHEMICAL SCIENCES (2011)
Role of structural MRI in Alzheimer's disease
Prashanthi Vemuri et al.
ALZHEIMERS RESEARCH & THERAPY (2010)
Langevin thermostat for rigid body dynamics
Ruslan L. Davidchack et al.
JOURNAL OF CHEMICAL PHYSICS (2009)
Protofibril assemblies of the arctic, dutch, and flemish mutants of the Alzheimer's Aβ1-40 peptide
Nicolas Lux Fawzi et al.
BIOPHYSICAL JOURNAL (2008)
A Vulnerability in Popular Molecular Dynamics Packages Concerning Langevin and Andersen Dynamics
David S. Cerutti et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2008)
Molecular structural basis for polymorphism in Alzheimer's β-amyloid fibrils
Anant K. Paravastu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
HOLLOW: Generating Accurate Representations of Channel and Interior Surfaces in Molecular Structures
Bosco K. Ho et al.
BMC STRUCTURAL BIOLOGY (2008)
Genetics of late-onset Alzheimer's disease: progress and prospect
Yonghong Li et al.
PHARMACOGENOMICS (2007)
Generalized Born model with a simple, robust molecular volume correction
John Mongan et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2007)
Bio3d: an R package for the comparative analysis of protein structures
Barry J. Grant et al.
BIOINFORMATICS (2006)
Molecular genetics of late-onset Alzheimer's disease
MI Kamboh
ANNALS OF HUMAN GENETICS (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Neuroimaging and early diagnosis of Alzheimer disease: A look to the future
JR Petrella et al.
RADIOLOGY (2003)
Pathogenic effects of D23N Iowa mutant amyloid β-protein
WE Van Nostrand et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
A proposed structural model for amyloid fibril elongation:: domain swapping forms an interdigitating β-structure polymer
N Sinha et al.
PROTEIN ENGINEERING (2001)
Share Paper
