4.5 Article

Evolutionary Plasticity of Mating-Type Determination Mechanisms in Paramecium aurelia Sibling Species

Journal

GENOME BIOLOGY AND EVOLUTION
Volume 13, Issue 2, Pages -

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/gbe/evaa258

Keywords

self-incompatibility systems; programmed genome rearrangements; evolutionary genomics; ciliates

Funding

  1. National Science Centre [2013/09/N/NZ8/03198, 2013/08/T/NZ1/00306]
  2. Agence Nationale de la Recherche [ANR 18-CE12-0005-01]
  3. Russian Foundation for Basic Research [1904-00710a]
  4. program Investissements d'Avenir [ANR-10-LABX-54 MEMOLIFE, ANR-10-IDEX-0001-02 PSL]
  5. St. Petersburg State University [1.42.1436.2015, COLLAB2020_1 50414369]

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Studies on the Paramecium aurelia complex have shown diversity in the mating-type systems among different species, with various genetic determinations and inheritance modes, all specifying mating type through mtA gene expression. These findings highlight the diverse molecular solutions explored among sibling species to maintain essential mating-type polymorphism in cell populations.
The Paramecium aurelia complex, a group of morphologically similar but sexually incompatible sibling species, is a unique example of the evolutionary plasticity of mating-type systems. Each species has two mating types, O (Odd) and E (Even). Although O and E types are homologous in all species, three different modes of determination and inheritance have been described: genetic determination by Mendelian alleles, stochastic developmental determination, and maternally inherited developmental determination. Previous work in three species of the latter kind has revealed the key roles of the E-specific transmembrane protein mtA and its highly specific transcription factor mtB: type O clones are produced by maternally inherited genome rearrangements that inactivate either mtA or mtB during development. Here we show, through transcriptome analyses in five additional species representing the three determination systems, that mtA expression specifies type E in all cases. We further show that the Mendelian system depends on functional and nonfunctional mtA alleles, and identify novel developmental rearrangements in mtA and mtB which now explain all cases of maternally inherited mating-type determination. Epistasis between these genes likely evolved from less specific interactions between paralogs in the P. aurelia common ancestor, after a whole-genome duplication, but the mtB gene was subsequently lost in three P. aurelia species which appear to have returned to an ancestral regulation mechanism. These results suggest a model accounting for evolutionary transitions between determination systems, and highlight the diversity of molecular solutions explored among sibling species to maintain an essential mating-type polymorphism in cell populations.

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