Journal
ENVIRONMENTAL MICROBIOLOGY
Volume 23, Issue 1, Pages -Publisher
WILEY
DOI: 10.1111/1462-2920.15337
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Funding
- Natural Environment Research Council as part of the UK-SCAPE programme delivering National Capability [NE/R016429/1]
- Natural Environment Research Council via UK-SCAPE [NE/R016429/1]
- Natural Environment Research Council via Achieving Sustainable Agricultural Systems (ASSIST) [NE/N018125/1]
- NERC [NE/N018125/1] Funding Source: UKRI
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The study of microbial communities in different habitats along the River Thames in the UK showed distinct differences in bacterial communities, with sediment and biofilm communities displaying higher homogeneity compared to free-living and particle-associated communities. This suggests that deterministic environmental filtering plays a larger role in shaping sediment and biofilm communities.
The heterogeneous nature of lotic habitats plays an important role in the complex ecological and evolutionary processes that structure the microbial communities within them. Due to such complexity, our understanding of lotic microbial ecology still lacks conceptual frameworks for the ecological processes that shape these communities. We explored how bacterial community composition and underlying ecological assembly processes differ between lotic habitats by examining community composition and inferring community assembly processes across four major habitat types (free-living, particle-associated, biofilm on benthic stones and rocks, and sediment). This was conducted at 12 river sites from headwater streams to the main river in the River Thames, UK. Our results indicate that there are distinct differences in the bacterial communities between four major habitat types, with contrasting ecological processes shaping their community assembly processes. While the mobile free-living and particle-associated communities were consistently less diverse than the fixed sediment and biofilm communities, the latter two communities displayed higher homogeneity across the sampling sites. This indicates that the relative influence of deterministic environmental filtering is elevated in sediment and biofilm communities compared with free-living and particle-associated communities, where stochastic processes play a larger role.
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