Related references
Note: Only part of the references are listed.The ribosomal RNA m5C methyltransferase NSUN-1 modulates healthspan and oogenesis in Caenorhabditis elegans
Clemens Heissenberger et al.
ELIFE (2020)
Identification of functional long non-coding RNAs in C. elegans
Alper Akay et al.
BMC BIOLOGY (2019)
Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution
Vahid Khoddami et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Genome-wide identification of mRNA 5-methylcytosine in mammals
Tao Huang et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2019)
5-methylcytosine promotes pathogenesis of bladder cancer through stabilizing mRNAs
Xin Chen et al.
NATURE CELL BIOLOGY (2019)
Mitochondrial Alkbh1 localizes to mtRNA granules and its knockdown induces the mitochondrial UPR in humans and C. elegans
Anita Wagner et al.
JOURNAL OF CELL SCIENCE (2019)
Loss of the ribosomal RNA methyltransferase NSUN5 impairs global protein synthesis and normal growth
Clemens Heissenberger et al.
NUCLEIC ACIDS RESEARCH (2019)
Post-transcriptional regulation by cytosine-5 methylation of RNA
Raquel Garcia-Vilchez et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2019)
Pseudouridine-Free Escherichia coli Ribosomes
Michael O'Connor et al.
JOURNAL OF BACTERIOLOGY (2018)
MODOMICS: a database of RNA modification pathways. 2017 update
Pietro Boccaletto et al.
NUCLEIC ACIDS RESEARCH (2018)
Statistically robust methylation calling for whole-transcriptome bisulfite sequencing reveals distinct methylation patterns for mouse RNAs
Carine Legrand et al.
GENOME RESEARCH (2017)
NSUN2-Mediated m5C Methylation and METTL3/METTL14-Mediated m6A Methylation Cooperatively Enhance p21 Translation
Qiu Li et al.
JOURNAL OF CELLULAR BIOCHEMISTRY (2017)
2′-O-Methyl-5-hydroxymethylcytidine: A Second Oxidative Derivative of 5-Methylcytidine in RNA
Sabrina M. Huber et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2017)
ALKBH1 is an RNA dioxygenase responsible for cytoplasmic and mitochondrial tRNA modifications
Layla Kawarada et al.
NUCLEIC ACIDS RESEARCH (2017)
Transcriptome-Wide Mapping of RNA 5-Methylcytosine in Arabidopsis mRNAs and Noncoding RNAs
Rakesh David et al.
PLANT CELL (2017)
Cytosine-5 RNA Methylation Regulates Neural Stem Cell Differentiation and Motility
Joana V. Flores et al.
STEM CELL REPORTS (2017)
The Profile and Dynamics of RNA Modifications in Animals
Pieter van Delft et al.
CHEMBIOCHEM (2017)
5-methylcytosine promotes mRNA export-NSUN2 as the methyltransferase and ALYREF as an m5C reader
Xin Yang et al.
CELL RESEARCH (2017)
Distinct 5-methylcytosine profiles in poly(A) RNA from mouse embryonic stem cells and brain
Thomas Amort et al.
GENOME BIOLOGY (2017)
GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes
Patricia P. Chan et al.
NUCLEIC ACIDS RESEARCH (2016)
Ensembl Genomes 2016: more genomes, more complexity
Paul Julian Kersey et al.
NUCLEIC ACIDS RESEARCH (2016)
NSUN3 and ABH1 modify the wobble position of mt-tRNAMet to expand codon recognition in mitochondrial translation
Sara Haag et al.
EMBO JOURNAL (2016)
Sequence-specific and Shape-selective RNA Recognition by the Human RNA 5-Methylcytosine Methyltransferase NSun6
Tao Long et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2016)
Dual randomization of oligonucleotides to reduce the bias in ribosome-profiling libraries
Aaron Lecanda et al.
METHODS (2016)
Stem cell function and stress response are controlled by protein synthesis
Sandra Blanco et al.
NATURE (2016)
NSUN3 methylase initiates 5-formylcytidine biogenesis in human mitochondrial tRNAMet
Saori Nakano et al.
NATURE CHEMICAL BIOLOGY (2016)
Deficient methylation and formylation of mt- tRNAMet wobble cytosine in a patient carrying mutations in NSUN3
Lindsey Van Haute et al.
NATURE COMMUNICATIONS (2016)
NSun2 delays replicative senescence by repressing p27 (KIP1) translation and elevating CDK1 translation
Hao Tang et al.
AGING-US (2015)
Conservation of tRNA and rRNA 5-methylcytosine in the kingdom Plantae
Alice Louise Burgess et al.
BMC PLANT BIOLOGY (2015)
Nop2 is expressed during proliferation of neural stem cells and in adult mouse and human brain
Nina Kosi et al.
BRAIN RESEARCH (2015)
Formation and Abundance of 5-Hydroxymethylcytosine in RNA
Sabrina M. Huber et al.
CHEMBIOCHEM (2015)
The tRNA methyltransferase Dnmt2 is required for accurate polypeptide synthesis during haematopoiesis
Francesca Tuorto et al.
EMBO JOURNAL (2015)
High Efficiency, Homology-Directed Genome Editing in Caenorhabditis elegans Using CRISPR-Cas9 Ribonucleoprotein Complexes
Alexandre Paix et al.
GENETICS (2015)
Investigation of polymorphisms in exon7 of the NSUN7 gene among Chinese Han men with asthenospermia
H. Y. Ren et al.
GENETICS AND MOLECULAR RESEARCH (2015)
The Nsun7 (A11337)-deletion mutation, causes reduction of its protein rate and associated with sperm motility defect in infertile men
Nahid Khosronezhad et al.
JOURNAL OF ASSISTED REPRODUCTION AND GENETICS (2015)
A Novel Single-Nucleotide Deletion (c.1020delA) in NSUN2 Causes Intellectual Disability in an Emirati Child
Makanko Komara et al.
JOURNAL OF MOLECULAR NEUROSCIENCE (2015)
The human 18S rRNA base methyltransferases DIMT1L and WBSCR22-TRMT112 but not rRNA modification are required for ribosome biogenesis
Christiane Zorbas et al.
MOLECULAR BIOLOGY OF THE CELL (2015)
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim et al.
NATURE METHODS (2015)
NSUN6 is a human RNA methyltransferase that catalyzes formation of m5C72 in specific tRNAs
Sara Haag et al.
RNA (2015)
'View From A Bricge': A New Perspective on Eukaryotic rRNA Base Modification
Sunny Sharma et al.
TRENDS IN BIOCHEMICAL SCIENCES (2015)
Methylation of ribosomal RNA by NSUN5 is a conserved mechanism modulating organismal lifespan
Markus Schosserer et al.
NATURE COMMUNICATIONS (2015)
Cytosine methylation of tRNA-Asp by DNMT2 has a role in translation of proteins containing poly-Asp sequences
Raghuvaran Shanmugam et al.
CELL DISCOVERY (2015)
HTSeq-a Python framework to work with high-throughput sequencing data
Simon Anders et al.
BIOINFORMATICS (2015)
Eukaryotic rRNA Modification by Yeast 5-Methylcytosine-Methyltransferases and Human Proliferation-Associated Antigen p120
Gabrielle Bourgeois et al.
PLOS ONE (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders
Sandra Blanco et al.
EMBO JOURNAL (2014)
Functional characterization of C-elegans Y-box-binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes
Andreas Arnold et al.
NUCLEIC ACIDS RESEARCH (2014)
NSUN4 Is a Dual Function Mitochondrial Protein Required for Both Methylation of 12S rRNA and Coordination of Mitoribosomal Assembly
Metodi Dimitrov Metodiev et al.
PLOS GENETICS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
Identification of direct targets and modified bases of RNA cytosine methyltransferases
Vahid Khoddami et al.
NATURE BIOTECHNOLOGY (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
Yeast Nop2 and Rcm1 methylate C2870 and C2278 of the 25S rRNA, respectively
Sunny Sharma et al.
NUCLEIC ACIDS RESEARCH (2013)
Transcriptome-Wide Mapping of 5-methylcytidine RNA Modifications in Bacteria, Archaea, and Yeast Reveals m5C within Archaeal mRNAs
Sarit Edelheit et al.
PLOS GENETICS (2013)
Transfer RNA modifications: nature's combinatorial chemistry playground
Jane E. Jackman et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2013)
Mutation in NSUN2, which Encodes an RNA Methyltransferase, Causes Autosomal-Recessive Intellectual Disability
Muzammil Ahmad Khan et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2012)
Mutations in NSUN2 Cause Autosomal-Recessive Intellectual Disability
Lia Abbasi-Moheb et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2012)
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
Evguenia Kopylova et al.
BIOINFORMATICS (2012)
Whole exome sequencing identifies a splicing mutation in NSUN2 as a cause of a Dubowitz-like syndrome
Fernando Jose Martinez et al.
JOURNAL OF MEDICAL GENETICS (2012)
RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis
Francesca Tuorto et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)
Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA
Jeffrey E. Squires et al.
NUCLEIC ACIDS RESEARCH (2012)
Structure of the human MTERF4-NSUN4 protein complex that regulates mitochondrial ribosome biogenesis
Henrik Spahr et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
A differential sequencing-based analysis of the C. elegans noncoding transcriptome
Tengfei Xiao et al.
RNA (2012)
Structure of the Essential MTERF4:NSUN4 Protein Complex Reveals How an MTERF Protein Collaborates to Facilitate rRNA Modification
Elena Yakubovskaya et al.
STRUCTURE (2012)
The tRNA methyltransferase NSun2 stabilizes p16INK4 mRNA by methylating the 3′-untranslated region of p16
Xiaotian Zhang et al.
NATURE COMMUNICATIONS (2012)
Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins
Clement T. Y. Chan et al.
NATURE COMMUNICATIONS (2012)
Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data
Zhi John Lu et al.
GENOME RESEARCH (2011)
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
Fabian Sievers et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Wobble base-pairing slows in vivo translation elongation in metazoans
Michael Stadler et al.
RNA (2011)
Do all modifications benefit all tRNAs?
Eric M. Phizicky et al.
FEBS LETTERS (2010)
RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage
Matthias Schaefer et al.
GENES & DEVELOPMENT (2010)
A Quantitative Systems Approach Reveals Dynamic Control of tRNA Modifications during Cellular Stress
Clement T. Y. Chan et al.
PLOS GENETICS (2010)
BSMAP: whole genome bisulfite sequence MAPping program
Yuanxin Li et al.
BMC BIOINFORMATICS (2009)
Unconventional decoding of the AUA codon as methionine by mitochondrial tRNAMet with the anticodon f5CAU as revealed with a mitochondrial in vitro translation system
Chie Takemoto et al.
NUCLEIC ACIDS RESEARCH (2009)
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
Nicholas T. Ingolia et al.
SCIENCE (2009)
Methylation of tRNAAsP by the DNA methyltransferase homolog Dnmt2
MG Goll et al.
SCIENCE (2006)
Genorne-wide RNAi screening in Caenorhabditis elegans
RS Kamath et al.
METHODS (2003)
RNA Methyltransferases utilize two cysteine residues in the formation of 5-methylcytosine
MY King et al.
BIOCHEMISTRY (2002)
Temperature sensitive nop2 alleles defective in synthesis of 25S rRNA and large ribosomal subunits in Saccharomyces cerevisiae
B Hong et al.
NUCLEIC ACIDS RESEARCH (2001)
m5C RNA and m5C DNA methyl transferases use different cysteine residues as catalysts
YQ Liu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
Share Paper
