Related references
Note: Only part of the references are listed.netNMF-sc: leveraging gene-gene interactions for imputation and dimensionality reduction in single-cell expression analysis
Rebecca Elyanow et al.
GENOME RESEARCH (2020)
Transcriptome Characterization of Matched Primary Breast and Brain Metastatic Tumors to Detect Novel Actionable Targets
Damir Vareslija et al.
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2019)
Transcriptome Characterization of Matched Primary Breast and Brain Metastatic Tumors to Detect Novel Actionable Targets
Damir Vareslija et al.
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2019)
Evolutionary Trajectories of IDHWT Glioblastomas Reveal a Common Path of Early Tumorigenesis Instigated Years ahead of Initial Diagnosis
Verena Koerber et al.
CANCER CELL (2019)
Metastatic breast cancers have reduced immune cell recruitment but harbor increased macrophages relative to their matched primary tumors
Li Zhu et al.
JOURNAL FOR IMMUNOTHERAPY OF CANCER (2019)
A UNIFIED STATISTICAL FRAMEWORK FOR SINGLE CELL AND BULK RNA SEQUENCING DATA
Lingxue Zhu et al.
ANNALS OF APPLIED STATISTICS (2018)
Deconvolution and phylogeny inference of structural variations in tumor genomic samples
Jesse Eaton et al.
BIOINFORMATICS (2018)
The evolution of tumour phylogenetics: principles and practice
Russell Schwartz et al.
NATURE REVIEWS GENETICS (2017)
Intrinsic Subtype Switching and Acquired ERBB2/HER2 Amplifications and Mutations in Breast Cancer Brain Metastases
Nolan Priedigkeit et al.
JAMA ONCOLOGY (2017)
Breast cancer brain metastases: biology and new clinical perspectives
Isabell Witzel et al.
BREAST CANCER RESEARCH (2016)
Genomic Characterization of Brain Metastases Reveals Branched Evolution and Potential Therapeutic Targets
Priscilla K. Brastianos et al.
CANCER DISCOVERY (2015)
Cancer metastases: challenges and opportunities
Xiangming Guan
ACTA PHARMACEUTICA SINICA B (2015)
Spatial and temporal diversity in genomic instability processes defines lung cancer evolution
Elza C. de Bruin et al.
SCIENCE (2014)
Inferring Clonal Composition from Multiple Sections of a Breast Cancer
Habil Zare et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Advances for studying clonal evolution in cancer
Li Ding et al.
CANCER LETTERS (2013)
NCBI GEO: archive for functional genomics data sets-update
Tanya Barrett et al.
NUCLEIC ACIDS RESEARCH (2013)
Apoptosis in cancer: from pathogenesis to treatment
Rebecca S. Y. Wong
JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH (2011)
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE
Peng Qiu et al.
NATURE BIOTECHNOLOGY (2011)
A Perspective on Cancer Cell Metastasis
Christine L. Chaffer et al.
SCIENCE (2011)
Applying unmixing to gene expression data for tumor phylogeny inference
Russell Schwartz et al.
BMC BIOINFORMATICS (2010)
A Differentiation-Based Phylogeny of Cancer Subtypes
Markus Riester et al.
PLOS COMPUTATIONAL BIOLOGY (2010)
Review: Targeting the Hedgehog pathway in cancer
Sachin Gupta et al.
Therapeutic Advances in Medical Oncology (2010)
MATRIX FACTORIZATION TECHNIQUES FOR RECOMMENDER SYSTEMS
Yehuda Koren et al.
COMPUTER (2009)
Network-Based Inference of Cancer Progression from Microarray Data
Yongjin Park et al.
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Deconvolution of Blood Microarray Data Identifies Cellular Activation Patterns in Systemic Lupus Erythematosus
Alexander R. Abbas et al.
PLOS ONE (2009)
Biological processes associated with breast cancer clinical outcome depend on the molecular subtypes
Christine Desmedt et al.
CLINICAL CANCER RESEARCH (2008)
Extracellular calcium and cAMP: Second messengers as third messengers?
Aldebaran M. Hofer et al.
PHYSIOLOGY (2007)
Scalable collaborative-filtering with jointly derived neighborhood interpolation weights
Robert M. Bell et al.
ICDM 2007: PROCEEDINGS OF THE SEVENTH IEEE INTERNATIONAL CONFERENCE ON DATA MINING (2007)
Tumor classification using phylogenetic methods on expression data
R Desper et al.
JOURNAL OF THEORETICAL BIOLOGY (2004)
The full Steiner tree problem
CL Lu et al.
THEORETICAL COMPUTER SCIENCE (2003)
Identifying biological themes within lists of genes with EASE
DA Hosack et al.
GENOME BIOLOGY (2003)
Dissemination and growth of cancer cells in metastatic sites
AF Chambers et al.
NATURE REVIEWS CANCER (2002)
Analysis of data from viral DNA microchips
D Amaratunga et al.
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION (2001)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)