4.6 Article

Quantitative analysis questions the role of MeCP2 as a global regulator of alternative splicing

Related references

Note: Only part of the references are listed.
Review Biochemistry & Molecular Biology

The Molecular Basis of MeCP2 Function in the Brain

Rebekah Tillotson et al.

JOURNAL OF MOLECULAR BIOLOGY (2020)

Article Biochemistry & Molecular Biology

MeCP2 Represses the Rate of Transcriptional Initiation of Highly Methylated Long Genes

Lisa D. Boxer et al.

MOLECULAR CELL (2020)

Article Biotechnology & Applied Microbiology

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

Daehwan Kim et al.

NATURE BIOTECHNOLOGY (2019)

Article Neurosciences

The distinct methylation landscape of maturing neurons and its role in Rett syndrome pathogenesis

Laura A. Lavery et al.

CURRENT OPINION IN NEUROBIOLOGY (2019)

Article Biochemistry & Molecular Biology

Transcription rate strongly affects splicing fidelity and cotranscriptionality in budding yeast

Vahid Aslanzadeh et al.

GENOME RESEARCH (2018)

Review Cell Biology

Alternative splicing as a regulator of development and tissue identity

Francisco E. Baralle et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)

Article Multidisciplinary Sciences

Intron retention is regulated by altered MeCP2-mediated splicing factor recruitment

Justin J. -L. Wong et al.

NATURE COMMUNICATIONS (2017)

Article Biochemistry & Molecular Biology

Early-Life Gene Expression in Neurons Modulates Lasting Epigenetic States

Hume Stroud et al.

Article Biotechnology & Applied Microbiology

BRIE: transcriptome-wide splicing quantification in single cells

Yuanhua Huang et al.

GENOME BIOLOGY (2017)

Article Multidisciplinary Sciences

DNA methylation in the gene body influences MeCP2-mediated gene repression

Benyam Kinde et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Review Genetics & Heredity

Non-CG Methylation in the Human Genome

Yupeng He et al.

ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 16 (2015)

Article Multidisciplinary Sciences

Disruption of DNA-methylation-dependent long gene repression in Rett syndrome

Harrison W. Gabel et al.

NATURE (2015)

Review Genetics & Heredity

Rett syndrome: a complex disorder with simple roots

Matthew J. Lyst et al.

NATURE REVIEWS GENETICS (2015)

Review Genetics & Heredity

The alternative role of DNA methylation in splicing regulation

Galit Lev Maor et al.

TRENDS IN GENETICS (2015)

Article Multidisciplinary Sciences

The human splicing code reveals new insights into the genetic determinants of disease

Hui Y. Xiong et al.

SCIENCE (2015)

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Orchestrated Intron Retention Regulates Normal Granulocyte Differentiation

Justin J-L Wong et al.

Article Biochemistry & Molecular Biology

Dynamic DNA methylation across diverse human cell lines and tissues

Katherine E. Varley et al.

GENOME RESEARCH (2013)

Article Multidisciplinary Sciences

Global Epigenomic Reconfiguration During Mammalian Brain Development

Ryan Lister et al.

SCIENCE (2013)

Review Cell Biology

The Role of MeCP2 in the Brain

Jacky Guy et al.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 27 (2011)

Article Biochemical Research Methods

BigWig and BigBed: enabling browsing of large distributed datasets

W. J. Kent et al.

BIOINFORMATICS (2010)

Article Multidisciplinary Sciences

Deciphering the splicing code

Yoseph Barash et al.

NATURE (2010)

Article Biochemical Research Methods

Analysis and design of RNA sequencing experiments for identifying isoform regulation

Yarden Katz et al.

NATURE METHODS (2010)

Article Multidisciplinary Sciences

Regulation of RNA splicing by the methylation-dependent transcriptional repressor methyl-CpG binding protein 2

JI Young et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Computer Science, Artificial Intelligence

Random forests

L Breiman

MACHINE LEARNING (2001)