4.7 Article

The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies

Related references

Note: Only part of the references are listed.
Article Biotechnology & Applied Microbiology

An RNA-Seq based gene expression atlas of the common bean

Jamie A. O'Rourke et al.

BMC GENOMICS (2014)

Article Biochemistry & Molecular Biology

Increased beta-Cyanoalanine Nitrilase Activity Improves Cyanide Tolerance and Assimilation in Arabidopsis

Brendan O'Leary et al.

MOLECULAR PLANT (2014)

Article Genetics & Heredity

A reference genome for common bean and genome-wide analysis of dual domestications

Jeremy Schmutz et al.

NATURE GENETICS (2014)

Review Plant Sciences

Replication protein A subunit 3 and the iron efficiency response in soybean

Sarah E. Atwood et al.

PLANT CELL AND ENVIRONMENT (2014)

Article Biochemistry & Molecular Biology

Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress

Yong Xin Wang

MOLECULAR BIOLOGY REPORTS (2013)

Article Plant Sciences

Understanding plant cold hardiness: an opinion

Lawrence V. Gusta et al.

PHYSIOLOGIA PLANTARUM (2013)

Article Plant Sciences

Analysis of the Alfalfa Root Transcriptome in Response to Salinity Stress

Olga A. Postnikova et al.

PLANT AND CELL PHYSIOLOGY (2013)

Review Plant Sciences

Nod factor perception protein carries weight in biotic interactions

Clare Gough et al.

TRENDS IN PLANT SCIENCE (2013)

Article Biochemistry & Molecular Biology

ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana

Michael Krogh Jensen et al.

FEBS OPEN BIO (2013)

Review Plant Sciences

Control of Arabidopsis Root Development

Jalean J. Petricka et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 63 (2012)

Review Plant Sciences

Phosphoinositide Signaling

Wendy F. Boss et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 63 (2012)

Article Biochemical Research Methods

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

Marcel H. Schulz et al.

BIOINFORMATICS (2012)

Article Biochemical Research Methods

CD-HIT: accelerated for clustering the next-generation sequencing data

Limin Fu et al.

BIOINFORMATICS (2012)

Article Biochemistry & Molecular Biology

LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumes

Jun Li et al.

NUCLEIC ACIDS RESEARCH (2012)

Review Plant Sciences

Never too many? How legumes control nodule numbers

Virginie Mortier et al.

PLANT CELL AND ENVIRONMENT (2012)

Review Plant Sciences

The Cassava Genome: Current Progress, Future Directions

Simon Prochnik et al.

TROPICAL PLANT BIOLOGY (2012)

Review Agronomy

Applied Genetics and Genomics in Alfalfa Breeding

Xuehui Li et al.

AGRONOMY-BASEL (2012)

Article Biotechnology & Applied Microbiology

Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing

Susanne U. Franssen et al.

BMC GENOMICS (2011)

Article Biotechnology & Applied Microbiology

Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis

Yuanhong Han et al.

BMC GENOMICS (2011)

Article Biochemistry & Molecular Biology

Differential expression in RNA-seq: A matter of depth

Sonia Tarazona et al.

GENOME RESEARCH (2011)

Review Plant Sciences

Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway

Imene Hichri et al.

JOURNAL OF EXPERIMENTAL BOTANY (2011)

Article Multidisciplinary Sciences

Genome sequence and analysis of the tuber crop potato

Xun Xu et al.

NATURE (2011)

Letter Biochemical Research Methods

SignalP 4.0: discriminating signal peptides from transmembrane regions

Thomas Nordahl Petersen et al.

NATURE METHODS (2011)

Article Mathematical & Computational Biology

UniProt Knowledgebase: a hub of integrated protein data

Michele Magrane

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2011)

Article Biochemistry & Molecular Biology

Protection of Sinorhizobium against Host Cysteine-Rich Antimicrobial Peptides Is Critical for Symbiosis

Andreas F. Haag et al.

PLOS BIOLOGY (2011)

Review Biochemistry & Molecular Biology

The regulation of carotenoid pigmentation in flowers

Changfu Zhu et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2010)

Article Plant Sciences

RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

Andrew J. Severin et al.

BMC PLANT BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Power of Deep Sequencing and Agilent Microarray for Gene Expression Profiling Study

Lin Feng et al.

MOLECULAR BIOTECHNOLOGY (2010)

Article Biochemistry & Molecular Biology

Genome-wide Identification of Polycomb-Associated RNAs by RIP-seq

Jing Zhao et al.

MOLECULAR CELL (2010)

Article Multidisciplinary Sciences

Genome sequence of the palaeopolyploid soybean

Jeremy Schmutz et al.

NATURE (2010)

Review Plant Sciences

How Many Peas in a Pod? Legume Genes Responsible for Mutualistic Symbioses Underground

Hiroshi Kouchi et al.

PLANT AND CELL PHYSIOLOGY (2010)

Article Biochemistry & Molecular Biology

VND-INTERACTING2, a NAC Domain Transcription Factor, Negatively Regulates Xylem Vessel Formation in Arabidopsis

Masatoshi Yamaguchi et al.

PLANT CELL (2010)

Article Multidisciplinary Sciences

Plant Peptides Govern Terminal Differentiation of Bacteria in Symbiosis

Willem Van de Velde et al.

SCIENCE (2010)

Article Plant Sciences

Single-Feature Polymorphism Discovery in the Transcriptome of Tetraploid Alfalfa

S. Samuel Yang et al.

PLANT GENOME (2009)

Article Biotechnology & Applied Microbiology

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead et al.

GENOME BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino et al.

GENOME RESEARCH (2008)

Article Biochemical Research Methods

Mapping and quantifying mammalian transcriptomes by RNA-Seq

Ali Mortazavi et al.

NATURE METHODS (2008)

Article Plant Sciences

A gene expression atlas of the model legume Medicago truncatula

Vagner A. Benedito et al.

PLANT JOURNAL (2008)

Article Multidisciplinary Sciences

The transcriptional landscape of the yeast genome defined by RNA sequencing

Ugrappa Nagalakshmi et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters

Leighton J. Core et al.

SCIENCE (2008)

Article Biochemical Research Methods

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

Weizhong Li et al.

BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

Cyanide metabolism in higher plants: Cyanoalanine hydratase is a NIT4 homolog

M Piotrowski et al.

PLANT MOLECULAR BIOLOGY (2006)

Article Cell Biology

Transcription switches for protoxylem and metaxylem vessel formation

M Kubo et al.

GENES & DEVELOPMENT (2005)

Article Genetics & Heredity

A gene expression map of Arabidopsis thaliana development

M Schmid et al.

NATURE GENETICS (2005)

Article Plant Sciences

Computational identification and characterization of novel genes from legumes

MA Graham et al.

PLANT PHYSIOLOGY (2004)

Article Multidisciplinary Sciences

Arabidopsis cyt1 mutants are deficient in a mannose-1-phosphate guanylyltransferase and point to a requirement of N-linked glycosylation for cellulose biosynthesis

W Lukowitz et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Biochemistry & Molecular Biology

Isolation and characterization of a D-7 LEA protein from pollen that stabilizes glasses in vitro

WF Wolkers et al.

BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY (2001)

Review Multidisciplinary Sciences

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

S Kaul et al.

NATURE (2000)