Related references
Note: Only part of the references are listed.De novo assembly and annotation of the Ganoderma australe genome
Daniel Agudelo-Valencia et al.
GENOMICS (2020)
RepeatModeler2 for automated genomic discovery of transposable element families
Jullien M. Flynn et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
Kai Blin et al.
NUCLEIC ACIDS RESEARCH (2019)
wgd-simple command line tools for the analysis of ancient whole-genome duplications
Arthur Zwaenepoel et al.
BIOINFORMATICS (2019)
UniProt: a worldwide hub of protein knowledge
Alex Bateman et al.
NUCLEIC ACIDS RESEARCH (2019)
The Gene Ontology Resource: 20 years and still GOing strong
S. Carbon et al.
NUCLEIC ACIDS RESEARCH (2019)
The Pfam protein families database in 2019
Sara El-Gebali et al.
NUCLEIC ACIDS RESEARCH (2019)
InterPro in 2019: improving coverage, classification and access to protein sequence annotations
Alex L. Mitchell et al.
NUCLEIC ACIDS RESEARCH (2019)
Whole-Genome Duplication and Yeast's Fruitful Way of Life
Ximena Escalera-Fanjul et al.
TRENDS IN GENETICS (2019)
Insight into plant cell wall degradation and pathogenesis of Ganoderma boninense via comparative genome analysis
Ahmad Bazli Ramzi et al.
PEERJ (2019)
OrthoFinder: phylogenetic orthology inference for comparative genomics
David M. Emms et al.
GENOME BIOLOGY (2019)
Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline
Shujun Ou et al.
GENOME BIOLOGY (2019)
The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database
Neil D. Rawlings et al.
NUCLEIC ACIDS RESEARCH (2018)
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
Han Zhang et al.
NUCLEIC ACIDS RESEARCH (2018)
Hypolipidaemic and anti-lipidperoxidant activities of Ganoderrna lucidum polysaccharide
Shengjun Wu
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2018)
Computational tools to unmask transposable elements
Patricia Goerner-Potvin et al.
NATURE REVIEWS GENETICS (2018)
Draft Genome Sequence of the Phytopathogenic Fungus Ganoderma boninense, the Causal Agent of Basal Stem Rot Disease on Oil Palm
Condro Utomo et al.
GENOME ANNOUNCEMENTS (2018)
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
Jaime Huerta-Cepas et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Increased rates of protein evolution and asymmetric deceleration after the whole-genome duplication in yeasts
Diana Ascencio et al.
BMC EVOLUTIONARY BIOLOGY (2017)
Phased diploid genome assembly with single-molecule real-time sequencing
Chen-Shan Chin et al.
NATURE METHODS (2016)
The diversity of fungal genome
Tapan Kumar Mohanta et al.
BIOLOGICAL PROCEDURES ONLINE (2015)
Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale
Hani Z. Girgis
BMC BIOINFORMATICS (2015)
Anti-diabetic effects of Ganoderma lucidum
Haou-Tzong Ma et al.
PHYTOCHEMISTRY (2015)
From 2000 years of Ganoderma lucidum to recent developments in nutraceuticals
Karen S. Bishop et al.
PHYTOCHEMISTRY (2015)
Chromosome-level genome map provides insights into diverse defense mechanisms in the medicinal fungus Ganoderma sinense
Yingjie Zhu et al.
SCIENTIFIC REPORTS (2015)
Origin of the Yeast Whole-Genome Duplication
Kenneth H. Wolfe
PLOS BIOLOGY (2015)
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
David M. Emms et al.
GENOME BIOLOGY (2015)
The genome of the Tiger Milk mushroom, Lignosus rhinocerotis, provides insights into the genetic basis of its medicinal properties
Hui-Yeng Y. Yap et al.
BMC GENOMICS (2014)
GHOSTX: An Improved Sequence Homology Search Algorithm Using a Query Suffix Array and a Database Suffix Array
Shuji Suzuki et al.
PLOS ONE (2014)
Estimating Gene Gain and Loss Rates in the Presence of Error in Genome Assembly and Annotation Using CAFE 3
Mira V. Han et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
treePL: divergence time estimation using penalized likelihood for large phylogenies
Stephen A. Smith et al.
BIOINFORMATICS (2012)
Genome sequence of the model medicinal mushroom Ganoderma lucidum
Shilin Chen et al.
NATURE COMMUNICATIONS (2012)
SignalP 4.0: discriminating signal peptides from transmembrane regions
Thomas Nordahl Petersen et al.
NATURE METHODS (2011)
A fungal phylogeny based on 82 complete genomes using the composition vector method
Hao Wang et al.
BMC EVOLUTIONARY BIOLOGY (2009)
A randomized, double-blind and placebo-controlled study of a Ganoderma lucidum polysaccharide extract in neurasthenia
WB Tang et al.
JOURNAL OF MEDICINAL FOOD (2005)
A combined transmembrane topology and signal peptide prediction method
L Käll et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach
MJ Sanderson
MOLECULAR BIOLOGY AND EVOLUTION (2002)