4.7 Article

Newt: a comprehensive web-based tool for viewing, constructing and analyzing biological maps

Journal

BIOINFORMATICS
Volume 37, Issue 10, Pages 1475-1477

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btaa850

Keywords

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Funding

  1. Scientific and Technological Research Council of Turkey [118E131, 5180088]
  2. Defense Advanced Research Projects Agency Communicating with Computers Program [W911NF-15-1-0544]
  3. Innovative Medicines Initiative Joint Undertaking from the European Union's Seventh Framework Programme (FP7/2007-2013) [IMI 115446]
  4. EFPIA companies

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Newt is a web-based tool developed for viewing, constructing and analyzing biological maps in standard formats like SBGN, SBML and SIF. It meets the considerable need for sophisticated pathway viewers and editors using the latest visualization techniques and libraries.
Motivation: Visualization of cellular processes and pathways is a key recurring requirement for effective biological data analysis. There is a considerable need for sophisticated web-based pathway viewers and editors operating with widely accepted standard formats, using the latest visualization techniques and libraries. Results: We developed a web-based tool named Newt for viewing, constructing and analyzing biological maps in standard formats such as SBGN, SBML and SIF.

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