4.0 Article

A role for theMEGF6gene in predisposition to osteoporosis

Journal

ANNALS OF HUMAN GENETICS
Volume 85, Issue 2, Pages 58-72

Publisher

WILEY
DOI: 10.1111/ahg.12408

Keywords

exome sequencing; osteoporosis; pedigree; predisposition; protein folding; zebrafish

Funding

  1. University of Utah Center on Aging
  2. Skaggs Foundation for Research
  3. National Institutes of Health [1R01HD081950, T15LM00712418, 1S10OD02164401A1, 1ULTR002538, P30 CA42014]
  4. Utah Genome Project

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Osteoporosis is a common skeletal disorder characterized by bone tissue deterioration. A rare variant in MEGF6(rs755467862) was found to be strongly associated with the disease phenotype, suggesting a role for MEGF6 in predisposition to osteoporosis.
Osteoporosis is a common skeletal disorder characterized by deterioration of bone tissue. The set of genetic factors contributing to osteoporosis is not completely specified. High-risk osteoporosis pedigrees were analyzed to identify genes that may confer susceptibility to disease. Candidate predisposition variants were identified initially by whole exome sequencing of affected-relative pairs, approximately cousins, from 10 pedigrees. Variants were filtered on the basis of population frequency, concordance between pairs of cousins, affecting a gene associated with osteoporosis, and likelihood to have functionally damaging, pathogenic consequences. Subsequently, variants were tested for segregation in 68 additional relatives of the index carriers. A rare variant inMEGF6(rs755467862) showed strong evidence of segregation with the disease phenotype. Predicted protein folding indicated the variant (Cys200Tyr) may disrupt structure of an EGF-like calcium-binding domain of MEGF6. Functional analyses demonstrated that complete loss of the paralogous genesmegf6aandmegf6bin zebrafish resulted in significant delay of cartilage and bone formation. Segregation analyses, in silico protein structure modeling, and functional assays support a role forMEGF6in predisposition to osteoporosis.

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