Journal
CANCERS
Volume 12, Issue 7, Pages -Publisher
MDPI
DOI: 10.3390/cancers12071982
Keywords
sponge circRNA; circHIPK3; circPVT1; circNF1; ciRS-7; circ_0000096; gastric carcinogenesis; gastrointestinal tumors
Categories
Funding
- Rede de Pesquisa em Genomica Populacional Humana (CAPES/Biologia Computacional) [3381/2013/CAPES]
- PROPESP/UFPA
- CAPES/BRASIL Post-Doctoral fellowship in Oncology and Medical Sciences - UFPA [51/2013/Biologia Computacional, 88887.313819/2019-00/CAPES]
- CNPq [304413/2015-1]
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Circular RNAs (circRNAs) are a new class of long noncoding RNAs able to perform multiple functions, including sponging microRNAs (miRNAs) and RNA-Binding Proteins (RBPs). They play an important role in gastric carcinogenesis, but its involvement during gastric cancer (GC) development and progression are not well understood. We gathered miRNA and/or RBPs sponge circRNAs present in GC, and accessed their biological roles through functional enrichment of their target genes or ligand RBPs. We identified 54 sponge circRNAs in GC that are able to sponge 51 miRNAs and 103 RBPs. Then, we evaluated their host gene expression using The Cancer Genome Atlas (TCGA) database and observed thatCOL1A2is the most overexpressed gene, which may be due to circHIPK3/miR-29b-c/COL1A2axis dysregulation. We identified 27 GC-related pathways that may be affected mainly by circPVT1, circHIPK3 and circNF1. Our results indicate that circHIPK3/miR-107/BDNF/LIN28axis may mediate chemoresistance in GC, and that circPVT1, circHIPK3, circNF1, ciRS-7 and circ_0000096 appear to be involved in gastrointestinal cancer development. Lastly, circHIPK3, circNRIP1 and circSMARCA5 were identified in different ethnic populations and may be ubiquitous modulators of gastric carcinogenesis. Overall, the studied sponge circRNAs are part of a complex RBP-circRNA-miRNA-mRNA interaction network, and are involved in the establishment, chemoresistance and progression of GC.
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