4.8 Article

Genome-wide kinetic properties of transcriptional bursting in mouse embryonic stem cells

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

A systematic evaluation of single cell RNA-seq analysis pipelines

Beate Vieth et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

Genomic encoding of transcriptional burst kinetics

Anton J. M. Larsson et al.

NATURE (2019)

Article Biochemistry & Molecular Biology

Dynamics and Spatial Genomics of the Nascent Transcriptome by Intron seqFISH

Sheel Shah et al.

Review Cell Biology

Born to run: control of transcription elongation by RNA polymerase II

Fei Xavier Chen et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2018)

Article Multidisciplinary Sciences

Single-cell full-length total RNA sequencing uncovers dynamics of recursive splicing and enhancer RNAs

Tetsutaro Hayashi et al.

NATURE COMMUNICATIONS (2018)

Review Developmental Biology

Making lineage decisions with biological noise: Lessons from the early mouse embryo

Claire S. Simon et al.

WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2018)

Article Biotechnology & Applied Microbiology

SCALE: modeling allele-specific gene expression by single-cell RNA sequencing

Yuchao Jiang et al.

GENOME BIOLOGY (2017)

Review Biochemistry & Molecular Biology

AKT/PKB Signaling: Navigating the Network

Brendan D. Manning et al.

Article Biochemistry & Molecular Biology

Enhancer Control of Transcriptional Bursting

Takashi Fukaya et al.

Article Biochemistry & Molecular Biology

Digital Quantification of Proteins and mRNA in Single Mammalian Cells

Cem Albayrak et al.

MOLECULAR CELL (2016)

Article Biotechnology & Applied Microbiology

CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq

Tamar Hashimshony et al.

GENOME BIOLOGY (2016)

Article Biochemistry & Molecular Biology

Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells

Allon M. Klein et al.

Article Cell & Tissue Engineering

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

Aleksandra A. Kolodziejczyk et al.

CELL STEM CELL (2015)

Article Biochemistry & Molecular Biology

Bursty Gene Expression in the Intact Mammalian Liver

Keren Bahar Halpern et al.

MOLECULAR CELL (2015)

Article Biochemistry & Molecular Biology

Structure of silent transcription intervals and noise characteristics of mammalian genes

Benjamin Zoller et al.

MOLECULAR SYSTEMS BIOLOGY (2015)

Article Cell Biology

Nuclear Retention of mRNA in Mammalian Tissues

Keren Bahar Halpern et al.

CELL REPORTS (2015)

Letter Biochemical Research Methods

Improved vectors and genome-wide libraries for CRISPR screening

Neville E. Sanjana et al.

NATURE METHODS (2014)

Article Multidisciplinary Sciences

Stochastic promoter activation affects Nanog expression variability in mouse embryonic stem cells

Hiroshi Ochiai et al.

SCIENTIFIC REPORTS (2014)

Article Biochemistry & Molecular Biology

Noise-mean relationship in mutated promoters

Gil Hornung et al.

GENOME RESEARCH (2012)

Article Multidisciplinary Sciences

Transcriptional burst frequency and burst size are equally modulated across the human genome

Roy D. Dar et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Review Genetics & Heredity

Interplay between gene expression noise and regulatory network architecture

Guilhem Chalancon et al.

TRENDS IN GENETICS (2012)

Article Multidisciplinary Sciences

Global quantification of mammalian gene expression control

Bjoern Schwanhaeusser et al.

NATURE (2011)

Article Genetics & Heredity

General properties of transcriptional time series in Escherichia coli

Lok-Hang So et al.

NATURE GENETICS (2011)

Article Multidisciplinary Sciences

Mammalian Genes Are Transcribed with Widely Different Bursting Kinetics

David M. Suter et al.

SCIENCE (2011)

Article Biochemistry & Molecular Biology

RNF12 Is an X-Encoded Dose-Dependent Activator of X Chromosome Inactivation

Iris Jonkers et al.

Review Biochemistry & Molecular Biology

A chance at survival: gene expression noise and phenotypic diversification strategies

Dawn Fraser et al.

MOLECULAR MICROBIOLOGY (2009)

Review Biochemistry & Molecular Biology

Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences

Arjun Raj et al.

Article Multidisciplinary Sciences

The ground state of embryonic stem cell self-renewal

Qi-Long Ying et al.

NATURE (2008)

Article Biochemistry & Molecular Biology

The polycomb group protein Suz12 is required for embryonic stem cell differentiation

Diego Pasini et al.

MOLECULAR AND CELLULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Stochastic mRNA synthesis in mammalian cells

Arjun Raj et al.

PLOS BIOLOGY (2006)

Article Multidisciplinary Sciences

Single-cell proteomic analysis of S-cerevisiae reveals the architecture of biological noise

John R. S. Newman et al.

NATURE (2006)

Article Multidisciplinary Sciences

Stochastic spineless expression creates the retinal mosaic for colour vision

MF Wernet et al.

NATURE (2006)

Article Biochemistry & Molecular Biology

Real-time kinetics of gene activity in individual bacteria

I Golding et al.

Article Multidisciplinary Sciences

Control of stochasticity in eukaryotic gene expression

JM Raser et al.

SCIENCE (2004)

Article Multidisciplinary Sciences

Stochastic gene expression in a single cell

MB Elowitz et al.

SCIENCE (2002)

Article Biochemistry & Molecular Biology

KEGG: Kyoto Encyclopedia of Genes and Genomes

M Kanehisa et al.

NUCLEIC ACIDS RESEARCH (2000)