Related references
Note: Only part of the references are listed.Re-definition of claudin-low as a breast cancer phenotype
Christian Fougner et al.
NATURE COMMUNICATIONS (2020)
ZEB1: A Critical Regulator of Cell Plasticity, DNA Damage Response, and Therapy Resistance
Stanislav Drapela et al.
FRONTIERS IN MOLECULAR BIOSCIENCES (2020)
Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology
Gregor Sturm et al.
BIOINFORMATICS (2019)
Cellular Pliancy and the Multistep Process of Tumorigenesis
Alain Puisieux et al.
CANCER CELL (2018)
Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines
Kyle Ellrott et al.
CELL SYSTEMS (2018)
Regulation of autophagy and EMT by the interplay between p53 and RAS during cancer progression
Xiaofei Zhang et al.
INTERNATIONAL JOURNAL OF ONCOLOGY (2017)
A stemness-related ZEB1-MSRB3 axis governs cellular pliancy and breast cancer genome stability
Anne-Pierre Morel et al.
NATURE MEDICINE (2017)
Oncogenic K-Ras upregulates ITGA6 expression via FOSL1 to induce anoikis resistance and synergizes with αV-Class integrins to promote EMT
K. Zhang et al.
ONCOGENE (2017)
Claudin-Low Breast Cancer; Clinical & Pathological Characteristics
Kay Dias et al.
PLOS ONE (2017)
DNA methylation at enhancers identifies distinct breast cancer lineages
Thomas Fleischer et al.
NATURE COMMUNICATIONS (2017)
xCell: digitally portraying the tissue cellular heterogeneity landscape
Dvir Aran et al.
GENOME BIOLOGY (2017)
Breast Cancer Molecular Stratification From Intrinsic Subtypes to Integrative Clusters
Hege G. Russnes et al.
AMERICAN JOURNAL OF PATHOLOGY (2017)
Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer
Deena M. A. Gendoo et al.
BIOINFORMATICS (2016)
Complex heatmaps reveal patterns and correlations in multidimensional genomic data
Zuguang Gu et al.
BIOINFORMATICS (2016)
Clinical implications of the intrinsic molecular subtypes of breast cancer
Aleix Prat et al.
BREAST (2015)
Reactivation of multipotency by oncogenic PIK3CA induces breast tumour heterogeneity
Alexandra Van Keymeulen et al.
NATURE (2015)
Barcoding reveals complex clonal dynamics of de novo transformed human mammary cells
Long V. Nguyen et al.
NATURE (2015)
PIK3CAH1047R induces multipotency and multi-lineage mammary tumours
Shany Koren et al.
NATURE (2015)
limma powers differential expression analyses for RNA-sequencing and microarray studies
Matthew E. Ritchie et al.
NUCLEIC ACIDS RESEARCH (2015)
Pediatric solid tumor genomics and developmental pliancy
X. Chen et al.
ONCOGENE (2015)
Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype
Eric R. Paquet et al.
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2015)
Epithelial-mesenchymal transition spectrum quantification and its efficacy in deciphering survival and drug responses of cancer patients
Tuan Zea Tan et al.
EMBO MOLECULAR MEDICINE (2014)
Claudin-low breast cancers: clinical, pathological, molecular and prognostic characterization
Renaud Sabatier et al.
MOLECULAR CANCER (2014)
ATM-mediated stabilization of ZEB1 promotes DNA damage response and radioresistance through CH K1
Peijing Zhang et al.
NATURE CELL BIOLOGY (2014)
A pan-cancer proteomic perspective on The Cancer Genome Atlas
Rehan Akbani et al.
NATURE COMMUNICATIONS (2014)
GSVA: gene set variation analysis for microarray and RNA-Seq data
Sonja Haenzelmann et al.
BMC BIOINFORMATICS (2013)
A new genome-driven integrated classification of breast cancer and its implications
Sarah-Jane Dawson et al.
EMBO JOURNAL (2013)
TCPA: a resource for cancer functional proteomics data
Jun Li et al.
NATURE METHODS (2013)
Genomics of Drug Sensitivity in Cancer (GDSC): a resource for therapeutic biomarker discovery in cancer cells
Wanjuan Yang et al.
NUCLEIC ACIDS RESEARCH (2013)
EMT-Induced Stemness and Tumorigenicity Are Fueled by the EGFR/Ras Pathway
Dominic Chih-Cheng Voon et al.
PLOS ONE (2013)
A Correction to the Research Article Titled: "Inositol Polyphosphate Multikinase Is a Coactivator of p53-Mediated Transcription and Cell Death" by R. Xu, N. Sen, B. D. Paul, A. M. Snowman, F. Rao, M. S. Vandiver, J. Xu, S. H. Snyder
Science Signaling (2013)
A Three-Gene Model to Robustly Identify Breast Cancer Molecular Subtypes
Benjamin Haibe-Kains et al.
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2012)
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
Jordi Barretina et al.
NATURE (2012)
Comprehensive molecular portraits of human breast tumours
Daniel C. Koboldt et al.
NATURE (2012)
The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups
Christina Curtis et al.
NATURE (2012)
qpure: A Tool to Estimate Tumor Cellularity from Genome-Wide Single-Nucleotide Polymorphism Profiles
Sarah Song et al.
PLOS ONE (2012)
The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data
Ethan Cerami et al.
CANCER DISCOVERY (2012)
EMT Inducers Catalyze Malignant Transformation of Mammary Epithelial Cells and Drive Tumorigenesis towards Claudin-Low Tumors in Transgenic Mice
Anne-Pierre Morel et al.
PLOS GENETICS (2012)
Basal-like and triple-negative breast cancers: a critical review with an emphasis on the implications for pathologists and oncologists
Sunil Badve et al.
MODERN PATHOLOGY (2011)
Deconstructing the molecular portraits of breast cancer
Aleix Prat et al.
MOLECULAR ONCOLOGY (2011)
The Transcription Factors Snail and Slug Activate the Transforming Growth Factor-Beta Signaling Pathway in Breast Cancer
Archana Dhasarathy et al.
PLOS ONE (2011)
A framework for oligonucleotide microarray preprocessing
Benilton S. Carvalho et al.
BIOINFORMATICS (2010)
Molecular Stratification of Triple-Negative Breast Cancers
Charles M. Perou
ONCOLOGIST (2010)
Allele-specific copy number analysis of tumors
Peter Van Loo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer
Aleix Prat et al.
BREAST CANCER RESEARCH (2010)
Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes
Joel S. Parker et al.
JOURNAL OF CLINICAL ONCOLOGY (2009)
A stroma-related gene signature predicts resistance to neoadjuvant chemotherapy in breast cancer
Pierre Farmer et al.
NATURE MEDICINE (2009)
Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers
Elgene Lim et al.
NATURE MEDICINE (2009)
The epithelial-mesenchymal transition generates cells with properties of stem cells
Sendurai A. Mani et al.
CELL (2008)
Generation of Breast Cancer Stem Cells through Epithelial-Mesenchymal Transition
Anne-Pierre Morel et al.
PLOS ONE (2008)
Meta-analysis of gene expression profiles in breast cancer: toward a unified understanding of breast cancer subtyping and prognosis signatures
Pratyaksha Wirapati et al.
BREAST CANCER RESEARCH (2008)
The ade4 package: Implementing the duality diagram for ecologists
Stephane Dray et al.
JOURNAL OF STATISTICAL SOFTWARE (2007)
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors
Jason I. Herschkowitz et al.
GENOME BIOLOGY (2007)
Model-based cluster and discriminant analysis with the MIXMOD software
Christophe Biernacki et al.
COMPUTATIONAL STATISTICS & DATA ANALYSIS (2006)
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Diagnosis of multiple cancer types by shrunken centroids of gene expression
R Tibshirani et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Molecular portraits of human breast tumours
CM Perou et al.
NATURE (2000)