4.8 Article

European polygenic risk score for prediction of breast cancer shows similar performance in Asian women

Journal

NATURE COMMUNICATIONS
Volume 11, Issue 1, Pages -

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/s41467-020-17680-w

Keywords

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Funding

  1. Newton-Ungku Omar Fund [MR/P012930/1]
  2. Wellcome Trust [v203477/Z/16/Z]
  3. Malaysian Ministry of Science
  4. Malaysian Ministry of Higher Education High Impact Research Grant [UM.C/HIR/MOHE/06]
  5. Sime Darby LPGA tournament
  6. High Impact Research Grant
  7. Yayasan Sime Darby
  8. PETRONAS
  9. Estee Lauder Group of Companies
  10. NUS Start Up Grant
  11. National University Cancer Institute Singapore (NCIS) Centre Grant
  12. NMRC Clinical Scientist Award
  13. NMRC Clinician Scientist Award-Senior Investigator
  14. Asian Breast Cancer Research Fund
  15. Breast Cancer Prevention Programme under Saw Swee Hock School of Public Health
  16. Biomedical Research Council [05/1/21/19/425]
  17. L'Oreal-UNESCO For Women in Science National Fellowship
  18. National Research Foundation Singapore Fellowship [NRF-NRFF2017-02]
  19. Cancer Research-UK [C12292/A20861]
  20. Government of Canada through Genome Canada
  21. Canadian Institutes of Health Research
  22. Ministere de l'Economie et de l'Innovation du Quebec through Genome Quebec
  23. Quebec Breast Cancer Foundation
  24. CHU de Quebec Foundation
  25. Ontario Research Fund
  26. PERSPECTIVE project - Government of Canada through Genome Canada
  27. 'Ministere de l'Economie, de la Science et de l'Innovation du Quebec' through Genome Quebec
  28. NCI Genetic Associations and Mechanisms in Oncology (GAME-ON) initiative
  29. Discovery, Biology and Risk of Inherited Variants in Breast Cancer (DRIVE) project (NIH Grants) [U19 CA148065, X01HG007492]
  30. Cancer Research UK [C1287/A10118, C1287/A16563]
  31. Caucasian Community's Seventh Framework Programme [223175 (HEALTH-F2-2009-223175)]
  32. Caucasian Union's Horizon 2020 Research and Innovation Programme [633784, 634935]
  33. National Institute of Health (NIH) Cancer Post-Cancer GWAS initiative grant [U19 CA 148065]
  34. H2020 Societal Challenges Programme [633784, 634935] Funding Source: H2020 Societal Challenges Programme
  35. MRC [MR/P012930/1] Funding Source: UKRI

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Polygenic risk scores (PRS) have been shown to predict breast cancer risk in European women, but their utility in Asian women is unclear. Here we evaluate the best performing PRSs for European-ancestry women using data from 17,262 breast cancer cases and 17,695 controls of Asian ancestry from 13 case-control studies, and 10,255 Chinese women from a prospective cohort (413 incident breast cancers). Compared to women in the middle quintile of the risk distribution, women in the highest 1% of PRS distribution have a similar to 2.7-fold risk and women in the lowest 1% of PRS distribution has similar to 0.4-fold risk of developing breast cancer. There is no evidence of heterogeneity in PRS performance in Chinese, Malay and Indian women. A PRS developed for European-ancestry women is also predictive of breast cancer risk in Asian women and can help in developing risk-stratified screening programmes in Asia.

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