4.7 Review

Challenges of Studying the Human Virome - Relevant Emerging Technologies

Journal

TRENDS IN MICROBIOLOGY
Volume 29, Issue 2, Pages 171-181

Publisher

CELL PRESS
DOI: 10.1016/j.tim.2020.05.021

Keywords

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Funding

  1. German Reaserch Foundation (DFG Emmy Noether program) [273124240, SFB 1371, 395357507]
  2. European Research Council [ERC StG 803077]

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This review provides an overview of current challenges and advances in bacteriophage research within viromics. The discussion focuses on technologies, limitations, and solutions from a human virome study perspective. Recent breakthroughs in metagenomics assembling tools and single-cell analysis have the potential to increase our understanding of phage biology, diversity, and interactions with microbial communities and the human body.
In this review we provide an overview of current challenges and advances in bacteriophage research within the growing field of viromics. In particular, we discuss, from a human virome study perspective, the current and emerging technologies available, their limitations in terms of de novo discoveries, and possible solutions to overcome present experimental and computational biases associated with low abundance of viral DNA or RNA. We summarize recent breakthroughs in metagenomics assembling tools and single-cell analysis, which have the potential to increase our understanding of phage biology, diversity, and interactions with both the microbial community and the human body. We expect that these recent and future advances in the field of viromics will have a strong impact on how we develop phage-based therapeutic approaches.

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