4.7 Article

Transfer Learning for Drug Discovery

Journal

JOURNAL OF MEDICINAL CHEMISTRY
Volume 63, Issue 16, Pages 8683-8694

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/acs.jmedchem.9b02147

Keywords

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Funding

  1. National Natural Science Foundation of China [21673010, 21633001]
  2. National Science and Technology Major Project Key New Drug Creation and Manufacturing Program, China [2018ZX09711002]
  3. Ministry of Science and Technology of China [2016YFA0502303]

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The data sets available to train models for in silico drug discovery efforts are often small. Indeed, the sparse availability of labeled data is a major barrier to artificial-intelligence-assisted drug discovery. One solution to this problem is to develop algorithms that can cope with relatively heterogeneous and scarce data. Transfer learning is a type of machine learning that can leverage existing, generalizable knowledge from other related tasks to enable learning of a separate task with a small set of data. Deep transfer learning is the most commonly used type of transfer learning in the field of drug discovery. This Perspective provides an overview of transfer learning and related applications to drug discovery to date. Furthermore, it provides outlooks on the future development of transfer learning for drug discovery.

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