Related references
Note: Only part of the references are listed.Inferring the soybean (Glycine max) microRNA functional network based on target gene network
Yungang Xu et al.
BIOINFORMATICS (2014)
Plant microRNA-Target Interaction Identification Model Based on the Integration of Prediction Tools and Support Vector Machine
Jun Meng et al.
PLOS ONE (2014)
Inferring Potential microRNA-microRNA Associations Based on Targeting Propensity and Connectivity in the Context of Protein Interaction Network
Jie Sun et al.
PLOS ONE (2013)
Prediction of Associations between OMIM Diseases and MicroRNAs by Random Walk on OMIM Disease Similarity Network
Hailin Chen et al.
SCIENTIFIC WORLD JOURNAL (2013)
Survey: Enhancing protein complex prediction in PPI networks with GO similarity weighting
True Price et al.
INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES (2013)
Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants
Basel Khraiwesh et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2012)
Detecting overlapping protein complexes in protein-protein interaction networks
Tamas Nepusz et al.
NATURE METHODS (2012)
Identification of Nitrogen Starvation-Responsive MicroRNAs in Arabidopsis thaliana
Gang Liang et al.
PLOS ONE (2012)
A novel network-based method for measuring the functional relationship between gene sets
Qianghu Wang et al.
BIOINFORMATICS (2011)
clusterMaker: a multi-algorithm clustering plugin for Cytoscape
John H. Morris et al.
BMC BIOINFORMATICS (2011)
Genome-wide analysis of clustering patterns and flanking characteristics for plant microRNA genes
Meng Zhou et al.
FEBS JOURNAL (2011)
Involvement of miR169 in the nitrogen-starvation responses in Arabidopsis
Meng Zhao et al.
NEW PHYTOLOGIST (2011)
MiRNA-miRNA synergistic network: construction via co-regulating functional modules and disease miRNA topological features
Juan Xu et al.
NUCLEIC ACIDS RESEARCH (2011)
psRNATarget: a plant small RNA target analysis server
Xinbin Dai et al.
NUCLEIC ACIDS RESEARCH (2011)
The Predicted Arabidopsis Interactome Resource and Network Topology-Based Systems Biology Analyses
Mingzhi Lin et al.
PLANT CELL (2011)
GOSemSim: an R package for measuring semantic similarity among GO terms and gene products
Guangchuang Yu et al.
BIOINFORMATICS (2010)
Inferring the human microRNA functional similarity and functional network based on microRNA-associated diseases
Dong Wang et al.
BIOINFORMATICS (2010)
Computational approaches for detecting protein complexes from protein interaction networks: a survey
Xiaoli Li et al.
BMC GENOMICS (2010)
Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis
Dov Moldovan et al.
JOURNAL OF EXPERIMENTAL BOTANY (2010)
The IntAct molecular interaction database in 2010
B. Aranda et al.
NUCLEIC ACIDS RESEARCH (2010)
Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana
Elena A. Vidal et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Complex discovery from weighted PPI networks
Guimei Liu et al.
BIOINFORMATICS (2009)
AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M. Brandao et al.
BMC BIOINFORMATICS (2009)
MicroRNAs: Target Recognition and Regulatory Functions
David P. Bartel
CELL (2009)
Uncovering Small RNA-Mediated Responses to Phosphate Deficiency in Arabidopsis by Deep Sequencing
Li-Ching Hsieh et al.
PLANT PHYSIOLOGY (2009)
Diversity and evolution of MicroRNA gene clusters
Zhang YanFeng et al.
SCIENCE IN CHINA SERIES C-LIFE SCIENCES (2009)
Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana
Han-Hua Liu et al.
RNA (2008)
Specific enrichment of miRNAs in Arabidopsis thaliana infected with Tobacco mosaic virus
Yuko Tagami et al.
DNA RESEARCH (2007)
Global and local architecture of the mammalian microRNA-transcription factor regulatory network
Reut Shalgi et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
A new method to measure the semantic similarity of GO terms
James Z. Wang et al.
BIOINFORMATICS (2007)
Measuring semantic similarity between Gene Ontology terms
Francisco M. Couto et al.
DATA & KNOWLEDGE ENGINEERING (2007)
High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes
Noah Fahlgren et al.
PLOS ONE (2007)
Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions
Hon Nian Chua et al.
BIOINFORMATICS (2006)
A new measure for functional similarity of gene products based on Gene Ontology
Andreas Schlicker et al.
BMC BIOINFORMATICS (2006)
MicroRNAs in cell proliferation, cell death, and tumorigenesis
HW Hwang et al.
BRITISH JOURNAL OF CANCER (2006)
BioGRID: a general repository for interaction datasets
Chris Stark et al.
NUCLEIC ACIDS RESEARCH (2006)
MicroRNAs: Genomics, biogenesis, mechanism, and function
DP Bartel
CELL (2004)
MicroRNAs and the regulation of cell death
PZ Xu et al.
TRENDS IN GENETICS (2004)
The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community
SY Rhee et al.
NUCLEIC ACIDS RESEARCH (2003)
Share Paper
