4.6 Article

DYNC2H1hypomorphic or retina-predominant variants cause nonsyndromic retinal degeneration

Journal

GENETICS IN MEDICINE
Volume 22, Issue 12, Pages 2041-2051

Publisher

ELSEVIER SCIENCE INC
DOI: 10.1038/s41436-020-0915-1

Keywords

inherited retinal disease (IRD); retinitis pigmentosa (RP); primary cilia; intraflagellar transport (IFT)

Funding

  1. Fighting Blindness Canada
  2. Vision Science Research Program
  3. University of Toronto McLaughlin Centre Whole Genome Sequence Initiative, Henry Brent Chair in Innovative Pediatric Ophthalmology Research
  4. Foundation Fighting Blindness, USA
  5. Brenda Eye Research Fund (Novartis)
  6. Fight For Sight (UK) Early Career Investigator Award
  7. National Institute For Health Research-Biomedical Research Centre at Great Ormond Street Hospital Institute for Child Health
  8. National Institute For Health Research-Biomedical Research Centre at Moorfields Eye Hospital
  9. UCL Institute of Ophthalmology
  10. National Institute for Health Research
  11. NHS England
  12. Wellcome Trust
  13. Cancer Research UK
  14. Medical Research Council
  15. Retina UK
  16. IRDC
  17. National Science Center (Poland) [UMO-2015/19/D/NZ2/03193]
  18. Royal Society [104196/Z/14/Z, RG170260]
  19. BBSRC [BB/P008348/1]
  20. Moorfields Eye Charity
  21. Wellcome Trust [104196/Z/14/Z] Funding Source: Wellcome Trust
  22. BBSRC [BB/P008348/1] Funding Source: UKRI
  23. MRC [MR/S006753/1] Funding Source: UKRI

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Purpose Determining the role ofDYNC2H1variants in nonsyndromic inherited retinal disease (IRD). Methods Genome and exome sequencing were performed for five unrelated cases of IRD with no identified variant. In vitro assays were developed to validate the variants identified (fibroblast assay, induced pluripotent stem cell [iPSC] derived retinal organoids, and a dynein motility assay). Results Four novelDYNC2H1variants (V1, g.103327020_103327021dup; V2, g.103055779A>T; V3, g.103112272C>G; V4, g.103070104A>C) and one previously reported variant (V5, g.103339363T>G) were identified. In proband 1 (V1/V2), V1 was predicted to introduce a premature termination codon (PTC), whereas V2 disrupted the exon 41 splice donor site causing incomplete skipping of exon 41. V1 and V2 impaired dynein-2 motility in vitro and perturbed IFT88 distribution within cilia. V3, homozygous in probands 2-4, is predicted to cause a PTC in a retina-predominant transcript. Analysis of retinal organoids showed that this new transcript expression increased with organoid differentiation. V4, a novel missense variant, was intranswith V5, previously associated with Jeune asphyxiating thoracic dystrophy (JATD). Conclusion TheDYNC2H1variants discussed herein were either hypomorphic or affecting a retina-predominant transcript and caused nonsyndromic IRD. Dynein variants, specificallyDYNC2H1variants are reported as a cause of non syndromic IRD.

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