Journal
MITOCHONDRIAL DNA PART B-RESOURCES
Volume 5, Issue 2, Pages 1638-1639Publisher
TAYLOR & FRANCIS LTD
DOI: 10.1080/23802359.2020.1745712
Keywords
Mitochondrial genome; Ulvophyceae; Ulva lactuca; intron; mutation
Categories
Funding
- Strategic Priority Research Program of the Chinese Academy of Sciences [XDA23050302, XDA23050403]
- National Natural Science Foundation of China [41876165]
- Key Research Program of Frontier Sciences, Chinese Academy of Sciences [QYZDB-SSW-DQC023]
- Major Scientific and Technological Innovation Project of Shandong Province [2019JZZY020706]
- Director Fund of Pilot National Laboratory for Marine Science and Technology (Qingdao) [QNLM201704]
- CAS Pioneer Hundred Talents Program
- Taishan Scholar Project Special Fund
- National Science Foundation (NSF) HBCU-UP [1436759]
- Direct For Education and Human Resources
- Division Of Human Resource Development [1436759] Funding Source: National Science Foundation
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Two mitogenomes of Ulva lactuca Linnaeus, one from Florida, USA and another nearly complete mtDNA from Chile, had previously been sequenced. Here, the complete mitogenome of U. lactuca from Shantou, China was sequenced and compared with them. The circular-mapping mitogenome of U. lactuca was 62,021 bp in size and 407 bases longer than that from the USA. The average sequence identity in gene sequence regions was 99.8% among these three U. lactuca mtDNAs. Differences in genome sizewere mainly caused by duplication mutations and insertion/deletion mutations of short DNA sequences. Two intergenic regions (nad6-trnS and trnF-trnG) contained long tandem repeats which displayed a high level of variation in repeat sequences and copy numbers, indicating fast mutation rates in these regions. The phylogenomic analysis revealed that these three samples of U. lactuca formed a strongly supported clade. The mitogenome can be used to understand the phylogeography and population genetics in Ulva on a global scale.
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