Journal
CANCERS
Volume 12, Issue 4, Pages -Publisher
MDPI
DOI: 10.3390/cancers12040771
Keywords
prostate cancer; epitranscriptome; N6-Methyladenosine; VIRMA; long non-coding RNAs
Categories
Funding
- Fundacao para a Ciencia e Tecnologia-FCT [POCI-01-0145-FEDER-29030]
- European COST Action EPITRAN [CA16120]
- FCT-Fundacao para a Ciencia e Tecnologia [SFRH/BD/136007/2018, SFRH/BD/132751/2017]
- Fundação para a Ciência e a Tecnologia [SFRH/BD/136007/2018] Funding Source: FCT
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RNA methylation at position N6 in adenosine (m(6)A) and its associated methyltransferase complex (MTC) are involved in tumorigenesis. We aimed to explore m(6)A biological function for long non-coding RNAs (lncRNAs) in prostate cancer (PCa) and its clinical significance. m(6)A and MTC levels in PCa cells were characterized by ELISA and western blot. Putative m(6)A-regulated lncRNAs were identified and validated by lncRNA profiler qPCR array and bioinformatics analysis, followed by m(6)A/RNA co-immunoprecipitation. Impact of m(6)A depletion on RNA stability was assessed by Actinomycin D assay. The association of m(6)A-levels with PCa prognosis was examined in clinical samples. Higher m(6)A-levels and VIRMA overexpression were detected in metastatic castration-resistant PCa (mCRPC) cells (p < 0.05). VIRMA knockdown in PC-3 cells significantly decreased m(6)A-levels (p = 0.0317), attenuated malignant phenotype and suppressed the expression of oncogenic lncRNAs CCAT1 and CCAT2 (p < 0.00001). VIRMA depletion and m(6)A reduction decreased the stability and abundance of CCAT1/2 transcripts. Higher expression of VIRMA, CCAT1, and CCAT2 as a group variable was an independent predictor of poor prognosis (HR = 9.083, CI95% 1.911-43.183, p = 0.006). VIRMA is a critical factor sustaining m(6)A-levels in PCa cells. VIRMA downregulation attenuates the aggressive phenotype of PCa by overall reduction of m(6)A-levels decreasing stability and abundance of oncogenic lncRNAs.
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