4.6 Article

Coexistence of Different Electron-Transfer Mechanisms in the DNA Repair Process by Photolyase

Journal

CHEMISTRY-A EUROPEAN JOURNAL
Volume 22, Issue 32, Pages 11371-11381

Publisher

WILEY-V C H VERLAG GMBH
DOI: 10.1002/chem.201600656

Keywords

ab initio calculations; electron transfer; electronic coupling; photolyase; QM/MM

Funding

  1. National Science Foundation [CHE1465138, ACI1053575, CNS0958854]
  2. NASA [NNX13AH33G]
  3. NSF [MCB0347087]
  4. Division Of Chemistry
  5. Direct For Mathematical & Physical Scien [1465138] Funding Source: National Science Foundation
  6. NASA [474491, NNX13AH33G] Funding Source: Federal RePORTER

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DNA photolyase has been the topic of extensive studies due to its important role of repairing photodamaged DNA, and its unique feature of using light as an energy source. A crucial step in the repair by DNA photolyase is the forward electron transfer from its cofactor (FADH(-)) to the damaged DNA, and the detailed mechanism of this process has been controversial. In the present study, we examine the forward electron transfer in DNA photolyase by carrying out high-level ab initio calculations in combination with a quantum mechanical/molecular mechanical (QM/MM) approach, and by measuring fluorescence emission spectra at low temperature. On the basis of these computational and experimental results, we demonstrate that multiple decay pathways exist in DNA photolyase depending on the wavelength at excitation and the subsequent transition. This implies that the forward electron transfer in DNA photolyase occurs not only by superexchange mechanism but also by sequential electron transfer.

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