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Advances in studying protein disorder with solid-state NMR

Journal

SOLID STATE NUCLEAR MAGNETIC RESONANCE
Volume 106, Issue -, Pages -

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.ssnmr.2020.101643

Keywords

Protein dynamics; Intrinsically disordered proteins; Solid-state NMR; Scalar coupling based methods; Frozen solution; Protein folding

Funding

  1. National Institutes of Health [R01GM110521, R01NS084345, R01AG061865]
  2. CHDI Foundation [A-12640]
  3. Micheal J. Fox Foundation [16204]

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Solution NMR is a key tool to study intrinsically disordered proteins (IDPs), whose importance for biological function is widely accepted. However, disordered proteins are not limited to solution and are also found in nonsoluble systems such as fibrils and membrane proteins. In this Trends article, I will discuss how solid-state NMR can be used to study disorder in non-soluble proteins. Techniques based on dipolar couplings can study static protein disorder which either occurs naturally as e.g. in spider silk or can be induced by freeze trapping IDPs or unfolded proteins. In this case, structural ensembles are directly reflected by a static distribution of dihedral angels that can be determined by the distribution of chemical shifts or other methods. Techniques based on J-couplings can detect dynamic protein disorder under MAS. In this case, only average chemical shifts are measured but disorder can be characterized with a variety of data including secondary chemical shifts, relaxation rates, paramagnetic relaxation enhancements, or residual dipolar couplings. I describe both technical aspects and examples of solid-state NMR on protein disorder and end the article with a discussion of challenges and opportunities of this emerging field.

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