Related references
Note: Only part of the references are listed.A tale of two risks: smoking, diabetes and the subgingival microbiome
Sukirth M. Ganesan et al.
ISME JOURNAL (2017)
Mapping the ecological networks of microbial communities
Yandong Xiao et al.
NATURE COMMUNICATIONS (2017)
Colonic Microbiota Encroachment Correlates With Dysglycemia in Humans
Benoit Chassaing et al.
CELLULAR AND MOLECULAR GASTROENTEROLOGY AND HEPATOLOGY (2017)
Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks
Sofie Van Landeghem et al.
BMC BIOINFORMATICS (2016)
PhyloToAST: Bioinformatics tools for species-level analysis and visualization of complex microbial datasets
Shareef M. Dabdoub et al.
SCIENTIFIC REPORTS (2016)
Comparative metagenomics reveals taxonomically idiosyncratic yet functionally congruent communities in periodontitis
Shareef M. Dabdoub et al.
SCIENTIFIC REPORTS (2016)
Using biological networks to integrate, visualize and analyze genomics data
Theodosia Charitou et al.
GENETICS SELECTION EVOLUTION (2016)
Adaptive immunity increases the pace and predictability of evolutionary change in commensal gut bacteria
Joao Barroso-Batista et al.
NATURE COMMUNICATIONS (2015)
Classification and Diagnosis of Diabetes
[Anonymous]
DIABETES CARE (2015)
Pathogens and host immunity in the ancient human oral cavity
Christina Warinner et al.
NATURE GENETICS (2014)
Deciphering microbial interactions and detecting keystone species with co-occurrence networks
David Berry et al.
FRONTIERS IN MICROBIOLOGY (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
A review of the evidence for pathogenic mechanisms that may link periodontitis and diabetes
John J. Taylor et al.
JOURNAL OF CLINICAL PERIODONTOLOGY (2013)
Subgingival biodiversity in subjects with uncontrolled type-2 diabetes and chronic periodontitis
R. C. V. Casarin et al.
JOURNAL OF PERIODONTAL RESEARCH (2013)
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
Morgan G. I. Langille et al.
NATURE BIOTECHNOLOGY (2013)
Periodontitis: a host-mediated disruption of microbial homeostasis. Unlearning learned concepts
P. Mark Bartold et al.
PERIODONTOLOGY 2000 (2013)
Using network analysis to explore co-occurrence patterns in soil microbial communities
Albert Barberan et al.
ISME JOURNAL (2012)
A metagenome-wide association study of gut microbiota in type 2 diabetes
Junjie Qin et al.
NATURE (2012)
Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease
Sharon Greenblum et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Diabetes mellitus and periodontitis: a tale of two common interrelated diseases
Evanthia Lalla et al.
NATURE REVIEWS ENDOCRINOLOGY (2011)
Target Region Selection Is a Critical Determinant of Community Fingerprints Generated by 16S Pyrosequencing
Purnima S. Kumar et al.
PLOS ONE (2011)
Using graph theory to analyze biological networks
Georgios A. Pavlopoulos et al.
BIODATA MINING (2011)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
An ecological and evolutionary perspective on human-microbe mutualism and disease
Les Dethlefsen et al.
NATURE (2007)
An algorithm for modularity analysis of directed and weighted biological networks based on edge-betweenness centrality
Jeongah Yoon et al.
BIOINFORMATICS (2006)
Changes in periodontal health status are associated with bacterial community shifts as assessed by quantitative 16S cloning and sequencing
Purnima S. Kumar et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2006)
The damage-response framework of microbial pathogenesis
A Casadevall et al.
NATURE REVIEWS MICROBIOLOGY (2003)
Host-pathogen interactions: Basic concepts of microbial commensalism, colonization, infection, and disease
A Casadevall et al.
INFECTION AND IMMUNITY (2000)