4.7 Article

Deep multi-instance heatmap regression for the detection of retinal vessel crossings and bifurcations in eye fundus images

Journal

Publisher

ELSEVIER IRELAND LTD
DOI: 10.1016/j.cmpb.2019.105201

Keywords

Deep learning; Eye fundus; Blood vessels; Crossings; Bifurcations; Landmark detection

Funding

  1. Instituto de Salud Carlos III, Government of Spain
  2. European Regional Development Fund (ERDF) of the European Union (EU) [DTS18/00136]
  3. Ministerio de Ciencia, Innovacion y Universidades, Government of Spain [DPI2015-69948-R, RTI2018-095894-B-I00]
  4. ERDF
  5. European Social Fund (ESF) of the EU
  6. Xunta de Galicia through Centro Singular de Investigacion de Galicia, accreditation 2016-2019 [ED431G/01]
  7. Xunta de Galicia through Grupo de Referencia Competitiva [ED431C 2016047]
  8. Xunta de Galicia [ED481A-2017/328]

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Background and objectives: The analysis of the retinal vasculature plays an important role in the diagnosis of many ocular and systemic diseases. In this context, the accurate detection of the vessel crossings and bifurcations is an important requirement for the automated extraction of relevant biomarkers. In that regard, we propose a novel approach that addresses the simultaneous detection of vessel crossings and bifurcations in eye fundus images. Method: We propose to formulate the detection of vessel crossings and bifurcations in eye fundus images as a multi-instance heatmap regression. In particular, a deep neural network is trained in the prediction of multi-instance heatmaps that model the likelihood of a pixel being a landmark location. This novel approach allows to make predictions using full images and integrates into a single step the detection and distinction of the vascular landmarks. Results: The proposed method is validated on two public datasets of reference that include detailed annotations for vessel crossings and bifurcations in eye fundus images. The conducted experiments evidence that the proposed method offers a satisfactory performance. In particular, the proposed method achieves 74.23% and 70.90% F-score for the detection of crossings and bifurcations, respectively, in color fundus images. Furthermore, the proposed method outperforms previous works by a significant margin. Conclusions: The proposed multi-instance heatmap regression allows to successfully exploit the potential of modern deep learning algorithms for the simultaneous detection of retinal vessel crossings and bifurcations. Consequently, this results in a significant improvement over previous methods, which will further facilitate the automated analysis of the retinal vasculature in many pathological conditions. (C) 2019 Elsevier B.V. All rights reserved.

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