Journal
BIOINFORMATICS
Volume 36, Issue 15, Pages 4345-4347Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btaa517
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Funding
- F.R.S.-FNRS
- European INTERREG Va SmartBioControl/Bioscreen project
- ALIBIOTECH program
- University of Liege 'Credit de demarrage 2012' [SFRD-12/04]
- F.R.S.-FNRS 'Credit de recherche 2014' [CDR J.0080.15]
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A Summary: To support small and large-scale genome mining projects, we present Post-processing Analysis tooLbox for ANTlsmash Reports (Palantir), a dedicated software suite for handling and refining secondary metabolite biosynthetic gene cluster (BGC) data annotated with the popular antiSMASH pipeline. Palantir provides new functionalities building on NRPS/PKS predictions from antiSMASH, such as improved BGC annotation, module delineation and easy access to sub-sequences at different levels (cluster, gene, module and domain). Moreover, it can parse user-provided antiSMASH reports and reformat them for direct use or storage in a relational database.
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