4.4 Article

Systematic Analysis of Impact of Sampling Regions and Storage Methods on Fecal Gut Microbiome and Metabolome Profiles

Related references

Note: Only part of the references are listed.
Article Public, Environmental & Occupational Health

Comparison of Collection Methods for Fecal Samples in Microbiome Studies

Emily Vogtmann et al.

AMERICAN JOURNAL OF EPIDEMIOLOGY (2017)

Article Environmental Sciences

Obesity aggravates toxic effect of BPA on spermatogenesis

Weiyue Hu et al.

ENVIRONMENT INTERNATIONAL (2017)

Article Oncology

Collecting Fecal Samples for Microbiome Analyses in Epidemiology Studies

Rashmi Sinha et al.

CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION (2016)

Article Gastroenterology & Hepatology

Assessment of Fecal Microbiota and Fecal Metabolome in Symptomatic Uncomplicated Diverticular Disease of the Colon

Antonio Tursi et al.

JOURNAL OF CLINICAL GASTROENTEROLOGY (2016)

Article Multidisciplinary Sciences

Acetate mediates a microbiome-brain-β-cell axis to promote metabolic syndrome

Rachel J. Perry et al.

NATURE (2016)

Article Multidisciplinary Sciences

Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity

Alexandra Zhernakova et al.

SCIENCE (2016)

Article Medicine, General & Internal

Gut Microbiota Linked to Sexual Preference and HIV Infection

Marc Noguera-Julian et al.

EBIOMEDICINE (2016)

Article Multidisciplinary Sciences

Dust Rains Deliver Diverse Assemblages of Microorganisms to the Eastern Mediterranean

Ghida Nouhad Itani et al.

SCIENTIFIC REPORTS (2016)

Article Public, Environmental & Occupational Health

Gut Microbiome Composition in Young Nicaraguan Children during Diarrhea Episodes and Recovery

Sylvia Becker-Dreps et al.

AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE (2015)

Article Respiratory System

Implications of multiple freeze-thawing on respiratory samples for culture-independent analyses

Leah Cuthbertson et al.

JOURNAL OF CYSTIC FIBROSIS (2015)

Article Biochemical Research Methods

Effect of preservation method on spider monkey (Ateles geoffroyi) fecal microbiota over 8 weeks

Vanessa L. Hale et al.

JOURNAL OF MICROBIOLOGICAL METHODS (2015)

Article Multidisciplinary Sciences

Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites

Alison N. Thorburn et al.

NATURE COMMUNICATIONS (2015)

Article Multidisciplinary Sciences

Gut mucosal microbiome across stages of colorectal carcinogenesis

Geicho Nakatsu et al.

NATURE COMMUNICATIONS (2015)

Article Multidisciplinary Sciences

Sample storage conditions significantly influence faecal microbiome profiles

Jocelyn M. Choo et al.

SCIENTIFIC REPORTS (2015)

Article Microbiology

Comparison of methods for fecal microbiome biospecimen collection

Christine Dominianni et al.

BMC MICROBIOLOGY (2014)

Article Biochemical Research Methods

UPARSE: highly accurate OTU sequences from microbial amplicon reads

Robert C. Edgar

NATURE METHODS (2013)

Article Biochemistry & Molecular Biology

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemical Research Methods

UCHIME improves sensitivity and speed of chimera detection

Robert C. Edgar et al.

BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

Brian J. Haas et al.

GENOME RESEARCH (2011)

Editorial Material Ecology

UniFrac: an effective distance metric for microbial community comparison

Catherine Lozupone et al.

ISME JOURNAL (2011)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Biotechnology & Applied Microbiology

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Patrick D. Schloss et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)

Article Biotechnology & Applied Microbiology

Mucosa-associated bacterial diversity in relation to human terminal ileum and colonic biopsy samples

Shakil Ahmed et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Endocrinology & Metabolism

Effects of simulated environmental conditions on glucocorticoid metabolite measurements in white-tailed deer feces

BE Washburn et al.

GENERAL AND COMPARATIVE ENDOCRINOLOGY (2002)