4.5 Article

Magia: Robust Automated Image Processing and Kinetic Modeling Toolbox for PET Neuroinformatics

Journal

FRONTIERS IN NEUROINFORMATICS
Volume 14, Issue -, Pages -

Publisher

FRONTIERS MEDIA SA
DOI: 10.3389/fninf.2020.00003

Keywords

PET; neuroinformatics; modeling; reference region; carfentanil; raclopride; madam; pib

Funding

  1. Academy of Finland [265915, 294897]
  2. Sigrid Juselius Foundation
  3. Paivikki and Sakari Sohlberg Foundation
  4. Finnish Cultural Foundation Varsinais-Suomi Regional Fund
  5. State Research Funding (VTR) for Turku University Hospital
  6. Academy of Finland (AKA) [294897, 265915, 265915, 294897] Funding Source: Academy of Finland (AKA)

Ask authors/readers for more resources

Processing of positron emission tomography (PET) data typically involves manual work, causing inter-operator variance. Here we introduce the Magia toolbox that enables processing of brain PET data with minimal user intervention. We investigated the accuracy of Magia with four tracers: [C-11]carfentanil, [C-11]raclopride, [C-11]MADAM, and [C-11]PiB. We used data from 30 control subjects for each tracer. Five operators manually delineated reference regions for each subject. The data were processed using Magia using the manually and automatically generated reference regions. We first assessed inter-operator variance resulting from the manual delineation of reference regions. We then compared the differences between the manually and automatically produced reference regions and the subsequently obtained binding potentials and standardized-uptake-value-ratios. The results show that manually produced reference regions can be remarkably different from each other, leading to substantial differences also in outcome measures. While the Magia-derived reference regions were anatomically different from the manual ones, Magia produced outcome measures highly consistent with the average of the manually obtained estimates. For [C-11]carfentanil and [C-11]PiB there was no bias, while for [C-11]raclopride and [C-11]MADAM Magia produced 3-5% higher binding potentials. Based on these results and considering the high inter-operator variance of the manual method, we conclude that Magia can be reliably used to process brain PET data.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.5
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

No Data Available
No Data Available