4.8 Article

The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly

Journal

NATURE COMMUNICATIONS
Volume 11, Issue 1, Pages -

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/s41467-019-14079-0

Keywords

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Funding

  1. NSW Genomics Collaborative Grants scheme from the NSW Office for Health and Medical Research
  2. National Institute on Aging
  3. National Cancer Institute at the National Institutes of Health [U01AG029824]
  4. National Health and Medical Research Council of Australia [334047, 1127060]
  5. Victorian Cancer Agency (Australia)
  6. Monash University (Australia)
  7. Commonwealth Scientific and Industrial Research Organisation (Australia)
  8. New South Wales Health, Collaborative Genomics grant programe
  9. NARSAD Independent Investigator Grant
  10. National Health and Medical Research Council (NHMRC) [1067137, 1147644, 1051672]
  11. Schizophrenia Research Institute (Australia)
  12. NSW Health
  13. Macquarie Group Foundation
  14. NHMRC [1104364, 1121474]
  15. NSW Health Early-Mid Career Fellowship
  16. University of Newcastle RHD
  17. Emlyn and Jennie Thomas Postgraduate Medical Research Scholarship
  18. Kinghorn Foundation
  19. Vodafone Foundation
  20. National Health and Medical Research Council of Australia [1121474, 1104364] Funding Source: NHMRC
  21. MRC [MC_PC_12028] Funding Source: UKRI

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Population health research is increasingly focused on the genetic determinants of healthy ageing, but there is no public resource of whole genome sequences and phenotype data from healthy elderly individuals. Here we describe the first release of the Medical Genome Reference Bank (MGRB), comprising whole genome sequence and phenotype of 2570 elderly Australians depleted for cancer, cardiovascular disease, and dementia. We analyse the MGRB for single-nucleotide, indel and structural variation in the nuclear and mitochondrial genomes. MGRB individuals have fewer disease-associated common and rare germline variants, relative to both cancer cases and the gnomAD and UK Biobank cohorts, consistent with risk depletion. Age-related somatic changes are correlated with grip strength in men, suggesting blood-derived whole genomes may also provide a biologic measure of age-related functional deterioration. The MGRB provides a broadly applicable reference cohort for clinical genetics and genomic association studies, and for understanding the genetics of healthy ageing. Healthspan and healthy aging are areas of research with potential socioeconomic impact. Here, the authors present the Medical Genome Reference Bank (MGRB) which consist of over 4,000 individuals aged 70 years and older without a history of the major age-related diseases and report on results from whole-genome sequencing and association analyses.

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