Related references
Note: Only part of the references are listed.fMRIPrep: a robust preprocessing pipeline for functional MRI
Oscar Esteban et al.
NATURE METHODS (2019)
Traumatic Brain Injury in Aged Mice Induces Chronic Microglia Activation, Synapse Loss, and Complement-Dependent Memory Deficits
Karen Krukowski et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2018)
Preclinical transgenic and patient-derived xenograft models recapitulate the radiological features of human adamantinomatous craniopharyngioma
Jessica K. R. Boult et al.
BRAIN PATHOLOGY (2018)
Mapping stress networks using functional magnetic resonance imaging in awake animals
David Dopfel et al.
NEUROBIOLOGY OF STRESS (2018)
Simultaneous GCaMP6-based fiber photometry and fMRI in rats
Zhifeng Liang et al.
JOURNAL OF NEUROSCIENCE METHODS (2017)
Quantitative magnetic resonance imaging of brain atrophy in a mouse model of Niemann-Pick type C disease
John W. Totenhagen et al.
PLOS ONE (2017)
A simple rapid process for semi-automated brain extraction from magnetic resonance images of the whole mouse head
Adam Delora et al.
JOURNAL OF NEUROSCIENCE METHODS (2016)
Deep MRI brain extraction: A 3D convolutional neural network for skull stripping
Jens Kleesiek et al.
NEUROIMAGE (2016)
Salvaging brain ischemia by increasing neuroprotectant uptake via nanoagonist mediated blood brain barrier permeability enhancement
Shuyan Zheng et al.
BIOMATERIALS (2015)
Mapping the functional network of medial prefrontal cortex by combining optogenetics and fMRI in awake rats
Zhifeng Liang et al.
NEUROIMAGE (2015)
The power of using functional fMRI on small rodents to study brain pharmacology and disease
Elisabeth Jonckers et al.
FRONTIERS IN PHARMACOLOGY (2015)
Brain Extraction Using Label Propagation and Group Agreement: Pincram
Rolf A. Heckemann et al.
PLOS ONE (2015)
RATS: Rapid Automatic Tissue Segmentation in rodent brain MRI
Ipek Oguz et al.
JOURNAL OF NEUROSCIENCE METHODS (2014)
Neuroplasticity to a single-episode traumatic stress revealed by resting-state fMRI in awake rats
Zhifeng Liang et al.
NEUROIMAGE (2014)
Waxholm Space atlas of the Sprague Dawley rat brain
Eszter A. Papp et al.
NEUROIMAGE (2014)
Advantages and Challenges of Small Animal Magnetic Resonance Imaging as a Translational Tool
Carolin Hoyer et al.
NEUROPSYCHOBIOLOGY (2014)
Multi-Atlas Skull-Stripping
Jimit Doshi et al.
ACADEMIC RADIOLOGY (2013)
An automatic rat brain extraction method based on a deformable surface model
Jiehua Li et al.
JOURNAL OF NEUROSCIENCE METHODS (2013)
The minimal preprocessing pipelines for the Human Connectome Project
Matthew F. Glasser et al.
NEUROIMAGE (2013)
BEaST: Brain extraction based on nonlocal segmentation technique
Simon F. Eskildsen et al.
NEUROIMAGE (2012)
Robust Automatic Rodent Brain Extraction Using 3-D Pulse-Coupled Neural Networks (PCNN)
Nigel Chou et al.
IEEE TRANSACTIONS ON IMAGE PROCESSING (2011)
Robust Brain Extraction Across Datasets and Comparison With Publicly Available Methods
Juan Eugenio Iglesias et al.
IEEE TRANSACTIONS ON MEDICAL IMAGING (2011)
Uncovering Intrinsic Connectional Architecture of Functional Networks in Awake Rat Brain
Zhifeng Liang et al.
JOURNAL OF NEUROSCIENCE (2011)
Brain MAPS: An automated, accurate and robust brain extraction technique using a template library
Kelvin K. Leung et al.
NEUROIMAGE (2011)
An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data
Brian B. Avants et al.
NEUROINFORMATICS (2011)
MRI in Rodent Models of Brain Disorders
Aleksandar Denic et al.
NEUROTHERAPEUTICS (2011)
Automatic Skull-stripping of Rat MRI/DTI Scans and Atlas Building
Ipek Oguz et al.
MEDICAL IMAGING 2011: IMAGE PROCESSING (2011)
Waxholm Space: An image-based reference for coordinating mouse brain research
G. Allan Johnson et al.
NEUROIMAGE (2010)
Automatic cropping of MRI rat brain volumes using pulse coupled neural networks
Murali Murugavel et al.
NEUROIMAGE (2009)
In vivo 3D digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy
Yu Ma et al.
FRONTIERS IN NEUROANATOMY (2008)
A three-dimensional digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy
Y Ma et al.
NEUROSCIENCE (2005)
Robust wide-baseline stereo from maximally stable extremal regions
J Matas et al.
IMAGE AND VISION COMPUTING (2004)
BrainSuite: An automated cortical surface identification tool
DW Shattuck et al.
MEDICAL IMAGE ANALYSIS (2002)
Magnetic resonance image tissue classification using a partial volume model
DW Shattuck et al.
NEUROIMAGE (2001)