Related references
Note: Only part of the references are listed.Reconciling disparate estimates of viral genetic diversity during human influenza infections
Katherine S. Xue et al.
NATURE GENETICS (2019)
Current and future influenza vaccines
Seiya Yamayoshi et al.
NATURE MEDICINE (2019)
Data resource profile: Household Influenza Vaccine Evaluation (HIVE) Study
Arnold S. Monto et al.
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY (2019)
Defective viral genomes are key drivers of the virus-host interaction
Marco Vignuzzi et al.
NATURE MICROBIOLOGY (2019)
Mapping person-to-person variation in viral mutations that escape polyclonal serum targeting influenza hemagglutinin
Juhye M. Lee et al.
ELIFE (2019)
Individual immune selection pressure has limited impact on seasonal influenza virus evolution
Alvin X. Han et al.
NATURE ECOLOGY & EVOLUTION (2019)
An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar
Nathan D. Grubaugh et al.
GENOME BIOLOGY (2019)
Measurements of intrahost viral diversity require an unbiased diversity metric
Lei Zhao et al.
VIRUS EVOLUTION (2019)
The evolution of seasonal influenza viruses
Velislava N. Petrova et al.
NATURE REVIEWS MICROBIOLOGY (2018)
Within-Host Evolution of Human Influenza Virus
Katherine S. Xue et al.
TRENDS IN MICROBIOLOGY (2018)
Genetic bottlenecks in intraspecies virus transmission
John T. McCrone et al.
CURRENT OPINION IN VIROLOGY (2018)
Stochastic processes constrain the within and between host evolution of influenza virus
John T. McCrone et al.
ELIFE (2018)
Genome-wide evolutionary dynamics of influenza B viruses on a global scale
Pinky Langat et al.
PLoS Pathogens (2017)
Vaccination has minimal impact on the intrahost diversity of H3N2 influenza viruses
Kari Debbink et al.
PLOS PATHOGENS (2017)
The Household Influenza Vaccine Effectiveness Study: Lack of Antibody Response and Protection Following Receipt of 2014-2015 Influenza Vaccine
Joshua G. Petrie et al.
CLINICAL INFECTIOUS DISEASES (2017)
Substantial Influenza Vaccine Effectiveness in Households With Children During the 2013-2014 Influenza Season, When 2009 Pandemic Influenza A(H1N1) Virus Predominated
Suzanne E. Ohmit et al.
JOURNAL OF INFECTIOUS DISEASES (2016)
Measurements of Intrahost Viral Diversity Are Extremely Sensitive to Systematic Errors in Variant Calling
John T. McCrone et al.
JOURNAL OF VIROLOGY (2016)
Deep Sequencing Reveals Potential Antigenic Variants at Low Frequencies in Influenza A Virus-Infected Humans
Jorge M. Dinis et al.
JOURNAL OF VIROLOGY (2016)
Deep Sequencing of Influenza A Virus from a Human Challenge Study Reveals a Selective Bottleneck and Only Limited Intrahost Genetic Diversification
Ashley Sobel Leonard et al.
JOURNAL OF VIROLOGY (2016)
The Mutational Robustness of Influenza A Virus
Elisa Visher et al.
PLOS PATHOGENS (2016)
Global circulation patterns of seasonal influenza viruses vary with antigenic drift
Trevor Bedford et al.
NATURE (2015)
The contrasting phylodynamics of human infuenza B viruses
Dhanasekaran Vijaykrishna et al.
ELIFE (2015)
Matters of Size: Genetic Bottlenecks in Virus Infection and Their Potential Impact on Evolution
Mark P. Zwart et al.
ANNUAL REVIEW OF VIROLOGY, VOL 2 (2015)
Reassortment between Influenza B Lineages and the Emergence of a Coadapted PB1-PB2-HA Gene Complex
Gytis Dudas et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Universal Influenza B Virus Genomic Amplification Facilitates Sequencing, Diagnostics, and Reverse Genetics
Bin Zhou et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
Frequency of Acute Respiratory Illnesses and Circulation of Respiratory Viruses in Households With Children Over 3 Surveillance Seasons
Arnold S. Monto et al.
JOURNAL OF INFECTIOUS DISEASES (2014)
The Burden of Influenza B: A Structured Literature Review
W. Paul Glezen et al.
AMERICAN JOURNAL OF PUBLIC HEALTH (2013)
Influenza Vaccine Effectiveness in the Community and the Household
Suzanne E. Ohmit et al.
CLINICAL INFECTIOUS DISEASES (2013)
Influenza Transmission in a Cohort of Households with Children: 2010-2011
Joshua G. Petrie et al.
PLOS ONE (2013)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Reliable detection of subclonal single-nucleotide variants in tumour cell populations
Moritz Gerstung et al.
NATURE COMMUNICATIONS (2012)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Diversifying Selective Pressure on Influenza B Virus Hemagglutinin
Jun Shen et al.
JOURNAL OF MEDICAL VIROLOGY (2009)
The evolutionary dynamics of human influenza B virus
Rubing Chen et al.
JOURNAL OF MOLECULAR EVOLUTION (2008)
The genomic and epidemiological dynamics of human influenza A virus
Andrew Rambaut et al.
NATURE (2008)
The evolution of epidemic influenza
Martha I. Nelson et al.
NATURE REVIEWS GENETICS (2007)
Stochastic processes are key determinants of short-term evolution in influenza A virus
Martha I. Nelson et al.
PLOS PATHOGENS (2006)
Comparison of the mutation rates of human influenza A and B viruses
E Nobusawa et al.
JOURNAL OF VIROLOGY (2006)
The population genetics and evolutionary epidemiology of RNA viruses
A Moya et al.
NATURE REVIEWS MICROBIOLOGY (2004)
Mortality associated with influenza and respiratory syncytial virus in the United States
WW Thompson et al.
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION (2003)