4.8 Article

Big data in IBD: big progress for clinical practice

Journal

GUT
Volume 69, Issue 8, Pages 1520-1532

Publisher

BMJ PUBLISHING GROUP
DOI: 10.1136/gutjnl-2019-320065

Keywords

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Funding

  1. European Research Council (ERC)
  2. ERC Advanced Grant (ERC-2015-AdG) [694679]
  3. Biotechnological and Biosciences Research Council (BBSRC) Norwich Research Park Biosciences Doctoral Training Partnership, as an NPIF Award [BB/S50743X/1]
  4. Quadram Institute (Norwich, UK)
  5. BBSRC [BB/J004529/1, BB/P016774/1, BB/CSP17270/1]
  6. BBSRC [BBS/E/T/000PR9817, BBS/E/F/000PR10355, BBS/E/T/000PR9819, BBS/E/F/00044500] Funding Source: UKRI
  7. European Research Council (ERC) [694679] Funding Source: European Research Council (ERC)

Ask authors/readers for more resources

IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and intrinsic factors, including host genetics, the immune system, environmental factors and the gut microbiome. Technological advancements such as next-generation sequencing, high-throughput omics data generation and molecular networks have catalysed IBD research. The advent of artificial intelligence, in particular, machine learning, and systems biology has opened the avenue for the efficient integration and interpretation of big datasets for discovering clinically translatable knowledge. In this narrative review, we discuss how big data integration and machine learning have been applied to translational IBD research. Approaches such as machine learning may enable patient stratification, prediction of disease progression and therapy responses for fine-tuning treatment options with positive impacts on cost, health and safety. We also outline the challenges and opportunities presented by machine learning and big data in clinical IBD research.

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