4.7 Article

PDEparams: parameter fitting toolbox for partial differential equations in python

Journal

BIOINFORMATICS
Volume 36, Issue 8, Pages 2618-2619

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btz938

Keywords

-

Funding

  1. Alfons und Gertrud Kassel-Stiftung
  2. Deutsche Forschungsgemeinschaft [HE7707/5-1]

Ask authors/readers for more resources

Motivationl: Partial differential equations (PDEs) is a well-established and powerful tool to simulate multi-cellular biological systems. However, available free tools for validation against data are on development. Results: The PDEparams module provides a flexible interface and readily accommodates different parameter analysis tools in PDE models such as computation of likelihood profiles, and parametric bootstrapping, along with direct visualization of the results. To our knowledge, it is the first open, freely available tool for parameter fitting of PDE models.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

No Data Available
No Data Available