4.7 Article

Differential Expression Gene Explorer (DrEdGE): a tool for generating interactive online visualizations of gene expression datasets

Journal

BIOINFORMATICS
Volume 36, Issue 8, Pages 2581-2583

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btz972

Keywords

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Funding

  1. National Institutes of Health [R01 GM083071, R35 GM134838]
  2. National Science Foundation [IOS 1557432]
  3. Damon Runyon Cancer Research Foundation [19-1211]

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A Summary: Differential Expression Gene Explorer (DrEdGE) is a web-based tool that guides genomicists through easily creating interactive online data visualizations, which colleagues can query according to their own conditions to discover genes, samples or patterns of interest. We demonstrate DrEdGE's features with three example websites generated from publicly available datasets-human neuronal tissue, mouse embryonic tissue and Caenorhabditis elegans whole embryos. DrEdGE increases the utility of large genomics datasets by removing technical obstacles to independent exploration.

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