Related references
Note: Only part of the references are listed.Identifying and Visualizing Functional PAM Diversity across CRISPR-Cas Systems
Ryan T. Leenay et al.
MOLECULAR CELL (2016)
The Bacteriophage Carrier State of Campylobacter jejuni Features Changes in Host Non-coding RNAs and the Acquisition of New Host-derived CRISPR Spacer Sequences
Steven P. T. Hooton et al.
FRONTIERS IN MICROBIOLOGY (2016)
BPGA- an ultra-fast pan-genome analysis pipeline
Narendrakumar M. Chaudhari et al.
SCIENTIFIC REPORTS (2016)
Co-transcriptional DNA and RNA Cleavage during Type III CRISPR-Cas Immunity
Poulami Samai et al.
CELL (2015)
The roles of CRISPR-Cas systems in adaptive immunity and beyond
Rodolphe Barrangou
CURRENT OPINION IN IMMUNOLOGY (2015)
Characterization and evolution of Salmonella CRISPR-Cas systems
Nikki Shariat et al.
MICROBIOLOGY-SGM (2015)
Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems
Sergey Shmakov et al.
MOLECULAR CELL (2015)
An updated evolutionary classification of CRISPR-Cas systems
Kira S. Makarova et al.
NATURE REVIEWS MICROBIOLOGY (2015)
Regulation of the Type I-F CRISPR-Cas system by CRP-cAMP and GaIM controls spacer acquisition and interference
Adrian G. Patterson et al.
NUCLEIC ACIDS RESEARCH (2015)
Sequences spanning the leader-repeat junction mediate CRISPR adaptation to phage in Streptococcus thermophilus
Yunzhou Wei et al.
NUCLEIC ACIDS RESEARCH (2015)
Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA
Hiroshi Nishimasu et al.
CELL (2014)
Whole genome sequencing reveals a novel CRISPR system in industrial Clostridium acetobutylicum
Lixin Peng et al.
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2014)
CRISPR-Cas Systems: Prokaryotes Upgrade to Adaptive Immunity
Rodolphe Barrangou et al.
MOLECULAR CELL (2014)
The three major types of CRISPR-Cas systems function independently in CRISPR RNA biogenesis in Streptococcus thermophilus
Jason Carte et al.
MOLECULAR MICROBIOLOGY (2014)
Classification and evolution of type II CRISPR-Cas systems
Krzysztof Chylinski et al.
NUCLEIC ACIDS RESEARCH (2014)
The basic building blocks and evolution of CRISPR-Cas systems
Kira S. Makarova et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2013)
Processing-Independent CRISPR RNAs Limit Natural Transformation in Neisseria meningitidis
Yan Zhang et al.
MOLECULAR CELL (2013)
Comparative genomics of defense systems in archaea and bacteria
Kira S. Makarova et al.
NUCLEIC ACIDS RESEARCH (2013)
CRISPRTarget: Bioinformatic prediction and analysis of crRNA targets
Ambarish Biswas et al.
RNA BIOLOGY (2013)
The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems
Krzysztof Chylinski et al.
RNA BIOLOGY (2013)
Protospacer recognition motifs: Mixed identities and functional diversity
Shiraz A. Shah et al.
RNA BIOLOGY (2013)
CRISPR-spacer integration reporter plasmids reveal distinct genuine acquisition specificities among CRISPR-Cas I-E variants of Escherichia coli
Cesar Diez-Villasenor et al.
RNA BIOLOGY (2013)
crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus
Tautvydas Karvelis et al.
RNA BIOLOGY (2013)
Complete Genomic Sequence of the Virulent Bacteriophage RAP44 of Riemerella anatipestifer
Long-fei Cheng et al.
AVIAN DISEASES (2012)
Comparative Genomic Structures of Mycobacterium CRISPR-Cas
Liming He et al.
JOURNAL OF CELLULAR BIOCHEMISTRY (2012)
Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli
Ido Yosef et al.
NUCLEIC ACIDS RESEARCH (2012)
Cleavage of Phage DNA by the Streptococcus thermophilus CRISPR3-Cas System
Alfonso H. Magadan et al.
PLOS ONE (2012)
A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity
Martin Jinek et al.
SCIENCE (2012)
Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system
Kirill A. Datsenko et al.
NATURE COMMUNICATIONS (2012)
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
Elitza Deltcheva et al.
NATURE (2011)
Evolution and classification of the CRISPR-Cas systems
Kira S. Makarova et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and Cleavage
Ruiying Wang et al.
STRUCTURE (2011)
Identification and characterization of E-coli CRISPR-cas promoters and their silencing by H-NS
Umit Pul et al.
MOLECULAR MICROBIOLOGY (2010)
The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA
Josiane E. Garneau et al.
NATURE (2010)
Self versus non-self discrimination during CRISPR RNA-directed immunity
Luciano A. Marraffini et al.
NATURE (2010)
CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea
Luciano A. Marraffini et al.
NATURE REVIEWS GENETICS (2010)
CRISPI: a CRISPR interactive database
Christine Rousseau et al.
BIOINFORMATICS (2009)
Short motif sequences determine the targets of the prokaryotic CRISPR defence system
F. J. M. Mojica et al.
MICROBIOLOGY-SGM (2009)
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
Sudhir Kumar et al.
BRIEFINGS IN BIOINFORMATICS (2008)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
Phage response to CRISPR-Encoded resistance in Streptococcus thermophilus
Helene Deveau et al.
JOURNAL OF BACTERIOLOGY (2008)
CRISPR provides acquired resistance against viruses in prokaryotes
Rodolphe Barrangou et al.
SCIENCE (2007)
Evolutionary conservation of sequence and secondary structures in CRISPR repeats
Victor Kunin et al.
GENOME BIOLOGY (2007)
The repetitive DNA elements called CRISPRs and their associated genes: Evidence of horizontal transfer among prokaryotes
James S. Godde et al.
JOURNAL OF MOLECULAR EVOLUTION (2006)
Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin
A Bolotin et al.
MICROBIOLOGY-SGM (2005)
Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
FJM Mojica et al.
JOURNAL OF MOLECULAR EVOLUTION (2005)
WebLogo: A sequence logo generator
GE Crooks et al.
GENOME RESEARCH (2004)
Mfold web server for nucleic acid folding and hybridization prediction
M Zuker
NUCLEIC ACIDS RESEARCH (2003)
Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome
MG Reese
COMPUTERS & CHEMISTRY (2001)