4.6 Article

Metagenomics of Atacama Lithobiontic Extremophile Life Unveils Highlights on Fungal Communities, Biogeochemical Cycles and Carbohydrate-Active Enzymes

Related references

Note: Only part of the references are listed.
Review Microbiology

An evolving view of methane metabolism in the Archaea

Paul N. Evans et al.

NATURE REVIEWS MICROBIOLOGY (2019)

Article Microbiology

Lithobiontic life: Atacama rocks are well and alive

Benito Gomez-Silva

ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2018)

Review Microbiology

Fungal diversity in the Atacama Desert

Iara F. Santiago et al.

ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2018)

Review Microbiology

Endolithic microbial habitats as refuges for life in polyextreme environment of the Atacama Desert

Jacek Wierzchos et al.

CURRENT OPINION IN MICROBIOLOGY (2018)

Review Microbiology

Recent Advances in Halophilic Protozoa Research

Tommy Harding et al.

JOURNAL OF EUKARYOTIC MICROBIOLOGY (2018)

Article Biochemistry & Molecular Biology

dbCAN2: a meta server for automated carbohydrate-active enzyme annotation

Han Zhang et al.

NUCLEIC ACIDS RESEARCH (2018)

Article Multidisciplinary Sciences

Identification of fungi in shotgun metagenomics datasets

Paul D. Donovan et al.

PLOS ONE (2018)

Article Microbiology

Unveiling microbial interactions in stratified mat communities from a warm saline shallow pond

Aurelien Saghai et al.

ENVIRONMENTAL MICROBIOLOGY (2017)

Article Ecology

Metals promote sequences of the reverse Krebs cycle

Kamila B. Muchowska et al.

NATURE ECOLOGY & EVOLUTION (2017)

Article Biochemical Research Methods

SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data

Genivaldo Gueiros Z. Silva et al.

BIOINFORMATICS (2016)

Review Microbiology

The Atacama Desert: Technical Resources and the Growing Importance of Novel Microbial Diversity

Alan T. Bull et al.

ANNUAL REVIEW OF MICROBIOLOGY, VOL 70 (2016)

Article Microbiology

Functional interactions of archaea, bacteria and viruses in a hypersaline endolithic community

Alexander Crits-Christoph et al.

ENVIRONMENTAL MICROBIOLOGY (2016)

Article Multidisciplinary Sciences

Fast and sensitive taxonomic classification for metagenomics with Kaiju

Peter Menzel et al.

NATURE COMMUNICATIONS (2016)

Review Biodiversity Conservation

Cyanobacteria in hypersaline environments: biodiversity and physiological properties

Aharon Oren

BIODIVERSITY AND CONSERVATION (2015)

Article Biotechnology & Applied Microbiology

Whole genome annotation and comparative genomic analyses of bio-control fungus Purpureocillium lilacinum

Pushplata Prasad et al.

BMC GENOMICS (2015)

Letter Biochemical Research Methods

The I-TASSER Suite: protein structure and function prediction

Jianyi Yang et al.

NATURE METHODS (2015)

Article Biochemical Research Methods

AliView: a fast and lightweight alignment viewer and editor for large datasets

Anders Larsson

BIOINFORMATICS (2014)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Article Biochemistry & Molecular Biology

Advances in understanding glycosyltransferases from a structural perspective

Tracey M. Gloster

CURRENT OPINION IN STRUCTURAL BIOLOGY (2014)

Article Biotechnology & Applied Microbiology

Deterioration, decay and identification of fungi isolated from wooden structures at the Humberstone and Santa Laura saltpeter works: A world heritage site in Chile

Rodrigo Ortiz et al.

INTERNATIONAL BIODETERIORATION & BIODEGRADATION (2014)

Article Biochemistry & Molecular Biology

Data, information, knowledge and principle: back to metabolism in KEGG

Minoru Kanehisa et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Microbiology

Microbiology of hyper-arid environments: recent insights from the Atacama Desert, Chile

Alan T. Bull et al.

ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

Building Phylogenetic Trees from Molecular Data with MEGA

Barry G. Hall

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Review Biotechnology & Applied Microbiology

Ecological Aspects of the Distribution of Different Autotrophic CO2 Fixation Pathways

Ivan A. Berg

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)

Article Environmental Sciences

Hypolithic communities: important nitrogen sources in Antarctic desert soils

D. A. Cowan et al.

ENVIRONMENTAL MICROBIOLOGY REPORTS (2011)

Review Microbiology

Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications

Kuo-Hsiang Tang et al.

FRONTIERS IN MICROBIOLOGY (2011)

Article Biotechnology & Applied Microbiology

Halophiles 2010: Life in Saline Environments

Y. Ma et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)

Review Microbiology

Autotrophic carbon fixation in archaea

Ivan A. Berg et al.

NATURE REVIEWS MICROBIOLOGY (2010)

Article Biochemistry & Molecular Biology

FragGeneScan: predicting genes in short and error-prone reads

Mina Rho et al.

NUCLEIC ACIDS RESEARCH (2010)

Editorial Material Microbiology

The microbial nitrogen cycle

Mike S. M. Jetten

ENVIRONMENTAL MICROBIOLOGY (2008)

Article Biochemistry & Molecular Biology

An improved general amino acid replacement matrix

Si Quang Le et al.

MOLECULAR BIOLOGY AND EVOLUTION (2008)

Article Biochemistry & Molecular Biology

MEGAN analysis of metagenomic data

Daniel H. Huson et al.

GENOME RESEARCH (2007)

Article Chemistry, Multidisciplinary

Driving parts of Krebs cycle in reverse through mineral photochemistry

Xiang V. Zhang et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)

Article Biochemistry & Molecular Biology

Dividing the large glycoside hydrolase family 13 into subfamilies:: towards improved functional annotations of α-amylase-related proteins

Mark R. Stam et al.

PROTEIN ENGINEERING DESIGN & SELECTION (2006)

Article Astronomy & Astrophysics

A preliminary survey of non-lichenized fungi cultured from the hyperarid Atacama Desert of Chile

Catharine A. Conley et al.

ASTROBIOLOGY (2006)

Review Microbiology

Prokaryotic sulfur oxidation

CG Friedrich et al.

CURRENT OPINION IN MICROBIOLOGY (2005)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Biology

Life at low water activity

WD Grant

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2004)

Article Biochemistry & Molecular Biology

An evolving hierarchical family classification for glycosyltransferases

PM Coutinho et al.

JOURNAL OF MOLECULAR BIOLOGY (2003)

Article Multidisciplinary Sciences

Human occupations and climate change in the Puna de Atacama, Chile

L Núñez et al.

SCIENCE (2002)