Journal
NEUROIMAGE
Volume 202, Issue -, Pages -Publisher
ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.neuroimage.2019.116137
Keywords
MRI; Software; Image; Processing; Visualisation
Funding
- National Health and Medical Research Council (NHMRC) of Australia [400121, 628952, 1091593, 1026077]
- Victorian Government's Operational Infrastructure Support Program
- European Research Council under the European Union [319456]
- Wellcome/EPSRC Centre for Medical Engineering at King's College London [WT 203148/Z/16/Z]
- Medical Research Council [MR/K006355/1]
- National Institute for Health Research (NIHR) Biomedical Research Centre based at Guy's and St Thomas' NHS Foundation Trust and King's College London
- National Imaging Facility (NIF), an Australian Government National Collaborative Research Infrastructure Strategy (NCRIS) capability
- Research Foundation Flanders (FWO Vlaanderen) [12M3116N, 12M3119N]
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MRtrix3 is an open-source, cross-platform software package for medical image processing, analysis and visualisation, with a particular emphasis on the investigation of the brain using diffusion MRI. It is implemented using a fast, modular and flexible general-purpose code framework for image data access and manipulation, enabling efficient development of new applications, whilst retaining high computational performance and a consistent command-line interface between applications. In this article, we provide a high-level overview of the features of the MRtrix3 framework and general-purpose image processing applications provided with the software.
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