Related references
Note: Only part of the references are listed.Metagenome-assembled genomes provide new insight into the microbial diversity of two thermal pools in Kamchatka, Russia
Laetitia G. E. Wilkins et al.
SCIENTIFIC REPORTS (2019)
The Archaellum of Methanospirillum hungatei Is Electrically Conductive
David J. F. Walker et al.
MBIO (2019)
Iron Corrosion via Direct Metal-Microbe Electron Transfer
Hai-Yan Tang et al.
MBIO (2019)
Baltic Sea methanogens compete with acetogens for electrons from metallic iron
Paola Andrea Palacios et al.
ISME JOURNAL (2019)
Life on the thermodynamic edge: Respiratory growth of an acetotrophic methanogen
Divya Prakash et al.
SCIENCE ADVANCES (2019)
Influence of pH on the balance between methanogenesis and iron reduction
Kyle A. Marquart et al.
GEOBIOLOGY (2019)
Extracellular Electron Uptake by Two Methanosarcina Species
Mon Oo Yee et al.
FRONTIERS IN ENERGY RESEARCH (2019)
Nutrient and acetate amendment leads to acetoclastic methane production and microbial community change in a non-producing Australian coal well
Michiel H. in 't Zandt et al.
MICROBIAL BIOTECHNOLOGY (2018)
Growth of sedimentary Bathyarchaeota on lignin as an energy source
Tiantian Yu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Methane Feedbacks to the Global Climate System in a Warmer World
Joshua F. Dean et al.
REVIEWS OF GEOPHYSICS (2018)
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
Christian M. K. Sieber et al.
NATURE MICROBIOLOGY (2018)
Differential depth distribution of microbial function and putative symbionts through sediment- hosted aquifers in the deep terrestrial subsurface
Alexander J. Probst et al.
NATURE MICROBIOLOGY (2018)
Viral and metabolic controls on high rates of microbial sulfur and carbon cycling in wetland ecosystems
Paula Dalcin Martins et al.
MICROBIOME (2018)
Simultaneous removal of organic matter and iron from hydraulic fracturing flowback water through sulfur cycling in a microbial fuel cell
Xiaoting Zhang et al.
WATER RESEARCH (2018)
Low-Abundance Members of the Firmicutes Facilitate Bioremediation of Soil Impacted by Highly Acidic Mine Drainage From the Malanjkhand Copper Project, India
Abhishek Gupta et al.
FRONTIERS IN MICROBIOLOGY (2018)
High-resolution sequencing reveals unexplored archaeal diversity in freshwater wetland soils
Adrienne B. Narrowe et al.
ENVIRONMENTAL MICROBIOLOGY (2017)
metaSPAdes: a new versatile metagenomic assembler
Sergey Nurk et al.
GENOME RESEARCH (2017)
Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments
Alex W. Hernsdorf et al.
ISME JOURNAL (2017)
BinSanity: unsupervised clustering of environmental microbial assemblies using coverage and affinity propagation
Elaina D. Graham et al.
PEERJ (2017)
Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions
Xing Xiang et al.
SCIENTIFIC REPORTS (2017)
Methanogens predominate in natural corrosion protective layers on metal sheet piles
Nardy Kip et al.
SCIENTIFIC REPORTS (2017)
Effects of alternative electron acceptors on the activity and community structure of methane-producing and consuming microbes in the sediments of two shallow boreal lakes
Antti J. Rissanen et al.
FEMS MICROBIOLOGY ECOLOGY (2017)
MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
Yu-Wei Wu et al.
BIOINFORMATICS (2016)
Phylogeny and physiology of candidate phylum 'Atribacteria' (OP9/JS1) inferred from cultivation-independent genomics
Masaru K. Nobu et al.
ISME JOURNAL (2016)
Pyrosequencing analysis of bacterial community diversity in long-term fertilized paddy field soil
Aileen Rose Daquiado et al.
APPLIED SOIL ECOLOGY (2016)
The Biodiversity Changes in the Microbial Population of Soils Contaminated with Crude Oil
Firouz Abbasian et al.
CURRENT MICROBIOLOGY (2016)
Methanogens rapidly transition from methane production to iron reduction
O. Sivan et al.
GEOBIOLOGY (2016)
Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system
Karthik Anantharaman et al.
NATURE COMMUNICATIONS (2016)
Genome-Centric Analysis of Microbial Populations Enriched by Hydraulic Fracture Fluid Additives in a Coal Bed Methane Production Well
Steven J. Robbins et al.
FRONTIERS IN MICROBIOLOGY (2016)
Genomic and enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments
Y. He et al.
NATURE MICROBIOLOGY (2016)
Bioelectrochemical Analyses of the Development of a Thermophilic Biocathode Catalyzing Electromethanogenesis
Qian Fu et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2015)
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Donovan H. Parks et al.
GENOME RESEARCH (2015)
PALEOENVIRONMENTAL RECONSTRUCTION OF A LATE CRETACEOUS, MUDDY, RIVER-DOMINATED POLAR DELTAIC SYSTEM: SCHRADER BLUFF-PRINCE CREEK FORMATION TRANSITION, SHIVUGAK BLUFFS, NORTH SLOPE OF ALASKA, USA
Dolores A. Van der Kolk et al.
JOURNAL OF SEDIMENTARY RESEARCH (2015)
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
Paul N. Evans et al.
SCIENCE (2015)
Two decades of warming increases diversity of a potentially lignolytic bacterial community
Grace Pold et al.
FRONTIERS IN MICROBIOLOGY (2015)
Solute Concentrations Influence Microbial Methanogenesis in Coal-bearing Strata of the Cherokee Basin, USA
Matthew F. Kirk et al.
FRONTIERS IN MICROBIOLOGY (2015)
The archaellum: how archaea swim
Sonja-Verena Albers et al.
FRONTIERS IN MICROBIOLOGY (2015)
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
Dongwan D. Kang et al.
PEERJ (2015)
Magnetite compensates for the lack of a pilin-associated c-type cytochrome in extracellular electron exchange
Fanghua Liu et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Characterization of Novel Polycyclic Aromatic Hydrocarbon Dioxygenases from the Bacterial Metagenomic DNA of a Contaminated Soil
Angelina Chemerys et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Illuminating Microbial Dark Matter in Meromictic Sakinaw Lake
Esther A. Gies et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Direct Interspecies Electron Transfer between Geobacter metallireducens and Methanosarcina barkeri
Amelia-Elena Rotaru et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Isolation and differentiation of methanogenic Archaea from mesophilic corn-fed on-farm biogas plants with special emphasis on the genus Methanobacterium
R. Stantscheff et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2014)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Characterization of new bacterial catabolic genes and mobile genetic elements by high throughput genetic screening of a soil metagenomic library
Samuel Jacquiod et al.
JOURNAL OF BIOTECHNOLOGY (2014)
Binning metagenomic contigs by coverage and composition
Johannes Alneberg et al.
NATURE METHODS (2014)
Time-Resolved DNA Stable Isotope Probing Links Desulfobacterales- and Coriobacteriaceae-Related Bacteria to Anaerobic Degradation of Benzene under Methanogenic Conditions
Mana Noguchi et al.
MICROBES AND ENVIRONMENTS (2014)
Stable carbon isotope biogeochemistry of propionate and acetate in methanogenic soils and lake sediments
R. Conrad et al.
ORGANIC GEOCHEMISTRY (2014)
Gene Capture Coupled to High-Throughput Sequencing as a Strategy for Targeted Metagenome Exploration
Jeremie Denonfoux et al.
DNA RESEARCH (2013)
The shielding effect of wild type iron reducing bacterial flora on the corrosion of linepipe steel
Faisal M. AlAbbas et al.
ENGINEERING FAILURE ANALYSIS (2013)
DNA-SIP Reveals That Syntrophaceae Play an Important Role in Methanogenic Hexadecane Degradation
Lei Cheng et al.
PLOS ONE (2013)
Draft Genome Sequence of Methanobacterium sp. Maddingley, Reconstructed from Metagenomic Sequencing of a Methanogenic Microbial Consortium Enriched from Coal-Seam Gas Formation Water
Carly P. Rosewarne et al.
GENOME ANNOUNCEMENTS (2013)
Clostridia: the importance of their exceptional substrate and metabolite diversity for biofuel and biorefinery applications
Bryan P. Tracy et al.
CURRENT OPINION IN BIOTECHNOLOGY (2012)
Marine sulfate-reducing bacteria cause serious corrosion of iron under electroconductive biogenic mineral crust
Dennis Enning et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Soil characteristics more strongly influence soil bacterial communities than land-use type
Eiko E. Kuramae et al.
FEMS MICROBIOLOGY ECOLOGY (2012)
Community Structure, Abundance, and Activity of Methanotrophs in the Zoige Wetland of the Tibetan Plateau
Juanli Yun et al.
MICROBIAL ECOLOGY (2012)
Characteristic microbial community of a dry thermophilic methanogenic digester: its long-term stability and change with feeding
Yue-Qin Tang et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2011)
Methanobacterium kanagiense sp nov., a hydrogenotrophic methanogen, isolated from rice-field soil
Koji Kitamura et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Metallic corrosion processes reactivation sustained by iron-reducing bacteria: Implication on long-term stability of protective layers
L. Esnault et al.
PHYSICS AND CHEMISTRY OF THE EARTH (2011)
Metabolic flexibility of sulfate-reducing bacteria
Caroline M. Plugge et al.
FRONTIERS IN MICROBIOLOGY (2011)
Fast and accurate long-read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2010)
The effect of nutrient deposition on bacterial communities in Arctic tundra soil
Barbara J. Campbell et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
Microbial and Mineralogical Characterizations of Soils Collected from the Deep Biosphere of the Former Homestake Gold Mine, South Dakota
Gurdeep Rastogi et al.
MICROBIAL ECOLOGY (2010)
Cultivation of Methanogens under Low-Hydrogen Conditions by Using the Coculture Method
Sanae Sakai et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Functional Characterization of a Bacterial Expansin From Bacillus subtilis for Enhanced Enzymatic Hydrolysis of Cellulose
Eun Sil Kim et al.
BIOTECHNOLOGY AND BIOENGINEERING (2009)
Role of iron-reducing bacteria in corrosion and protection of carbon steel
Liz Karen Herrera et al.
INTERNATIONAL BIODETERIORATION & BIODEGRADATION (2009)
Understanding microbial inhibition of corrosion. A comprehensive overview
Hector A. Videla et al.
INTERNATIONAL BIODETERIORATION & BIODEGRADATION (2009)
Competition of Fe(III) reduction and methanogenesis in an acidic fen
Marco Reiche et al.
FEMS MICROBIOLOGY ECOLOGY (2008)
The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation
Umakanth Kunapuli et al.
ISME JOURNAL (2007)
Biofilms: strategies for metal corrosion inhibition employing microorganisms
Rongjun Zuo
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2007)
Distribution of candidate division JS1 and other Bacteria in tidal sediments of the German Wadden Sea using targeted 16S rRNA gene PCR-DGGE
Gordon Webster et al.
FEMS MICROBIOLOGY ECOLOGY (2007)
Possible contributions of volatile-producing bacteria to soil fungistasis
Chang-Song Zou et al.
SOIL BIOLOGY & BIOCHEMISTRY (2007)
KAAS: an automatic genome annotation and pathway reconstruction server
Yuki Moriya et al.
NUCLEIC ACIDS RESEARCH (2007)
Microbial corrosion of galvanized steel by a freshwater strain of sulphate reducing bacteria (Desulfovibrio sp.)
E. Ilhan-Sungur et al.
CORROSION SCIENCE (2007)
Dominant bacteria in soils of Marble Point and Wright Valley, Victoria Land, Antarctica
Jackie. M. Aislabie et al.
SOIL BIOLOGY & BIOCHEMISTRY (2006)
Antimicrobial activities of some Bacillus spp. strains isolated from the soil
M Yilmaz et al.
MICROBIOLOGICAL RESEARCH (2006)
Carbon-13 natural abundance as a tool to study the dynamics of lignin monomers in soil: an appraisal at the Closeaux experimental field (France)
MF Dignac et al.
GEODERMA (2005)
Trophic interactions in the methanogenic microbial community of low-temperature terrestrial ecosystems
OR Kotsyurbenko
FEMS MICROBIOLOGY ECOLOGY (2005)
Pitting corrosion of titanium by a freshwater strain of sulphate reducing bacteria (Desulfovibrio vulgaris)
TS Rao et al.
CORROSION SCIENCE (2005)
NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
KD Pruitt et al.
NUCLEIC ACIDS RESEARCH (2005)
Iron corrosion by novel anaerobic microorganisms
HT Dinh et al.
NATURE (2004)
Biodegradation of hydrocarbons in soil by microbial consortium
FM Ghazali et al.
INTERNATIONAL BIODETERIORATION & BIODEGRADATION (2004)
Syntrophic-methanogenic associations along a nutrient gradient in the Florida Everglades
A Chauhan et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Enhanced sensitivity of DNA- and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients
T Lueders et al.
ENVIRONMENTAL MICROBIOLOGY (2004)
Clostridium phytofermentans sp nov., a cellulolytic mesophile from forest soil
TA Warnick et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2002)
Polycyclic aromatic hydrocarbons: environmental pollution and bioremediation
SK Samanta et al.
TRENDS IN BIOTECHNOLOGY (2002)
Artemis: sequence visualization and annotation
K Rutherford et al.
BIOINFORMATICS (2000)
Carbon steel corrosion by iron oxidising and sulphate reducing bacteria in a freshwater cooling system
TS Rao et al.
CORROSION SCIENCE (2000)
Methanobacterium oryzae sp nov., a novel methanogenic rod isolated from a Philippines ricefield
C Joulian et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)