Related references
Note: Only part of the references are listed.To B or not to B: a tale of unorthodox chromosomes
Jessica L. Soyer et al.
CURRENT OPINION IN MICROBIOLOGY (2018)
Accessories Make the Outfit: Accessory Chromosomes and Other Dispensable DNA Regions in Plant-Pathogenic Fungi
Stefania Bertazzoni et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2018)
Threat of wheat blast to South Asia's food security: An ex-ante analysis
Khondoker Abdul Mottaleb et al.
PLOS ONE (2018)
Gene Flow between Divergent Cereal- and Grass-Specific Lineages of the Rice Blast Fungus Magnaporthe oryzae
Pierre Gladieux et al.
MBIO (2018)
Meiotic drive of female-inherited supernumerary chromosomes in a pathogenic fungus
Michael Habig et al.
ELIFE (2018)
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Sergey Koren et al.
GENOME RESEARCH (2017)
PacBio Sequencing Reveals Transposable Elements as a Key Contributor to Genomic Plasticity and Virulence Variation in Magnaporthe oryzae
Jiandong Bao et al.
MOLECULAR PLANT (2017)
Evolution and genome architecture in fungal plant pathogens
Mareike Moeller et al.
NATURE REVIEWS MICROBIOLOGY (2017)
The Lolium Pathotype of Magnaporthe oryzae Recovered from a Single Blasted Wheat Plant in the United States
Mark Farman et al.
PLANT DISEASE (2017)
Evolution of the wheat blast fungus through functional losses in a host specificity determinant
Yoshihiro Inoue et al.
SCIENCE (2017)
The arms race between Magnaporthe oryzae and rice: Diversity and interaction of Avr and R genes
Wang Bao-hua et al.
JOURNAL OF INTEGRATIVE AGRICULTURE (2017)
Wheat blast disease: danger on the move
Christian D. Cruz et al.
TROPICAL PLANT PATHOLOGY (2017)
MGEScan: a Galaxy-based system for identifying retrotransposons in genomes
Hyungro Lee et al.
BIOINFORMATICS (2016)
Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae
M. Tofazzal Islam et al.
BMC BIOLOGY (2016)
Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements
Kentaro Yoshida et al.
BMC GENOMICS (2016)
Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen
Adriaan Vanheule et al.
BMC GENOMICS (2016)
The 2NS Translocation from Aegilops ventricosa Confers Resistance to the Triticum Pathotype of Magnaporthe oryzae
C. D. Cruz et al.
CROP SCIENCE (2016)
Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen
Luigi Faino et al.
GENOME RESEARCH (2016)
Integration of decoy domains derived from protein targets of pathogen effectors into plant immune receptors is widespread
Thomas Kroj et al.
NEW PHYTOLOGIST (2016)
First Report of Wheat Blast Caused by Magnaporthe otyzae Pathotype triticum in Bangladesh.
P. K. Malaker et al.
PLANT DISEASE (2016)
Function and evolution of Magnaporthe oryzae avirulence gene AvrPib responding to the rice blast resistance gene Pib
Shulin Zhang et al.
SCIENTIFIC REPORTS (2015)
Global Genome and Transcriptome Analyses of Magnaporthe oryzae Epidemic Isolate 98-06 Uncover Novel Effectors and Pathogenicity-Related Genes, Revealing Gene Gain and Lose Dynamics in Genome Evolution
Yanhan Dong et al.
PLOS PATHOGENS (2015)
Repbase Update, a database of repetitive elements in eukaryotic genomes
Weidong Bao et al.
MOBILE DNA (2015)
Novel Insights into Rice Innate Immunity Against Bacterial and Fungal Pathogens
Wende Liu et al.
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 52 (2014)
Fusarium verticillioides SGE1 Is Required for Full Virulence and Regulates Expression of Protein Effector and Secondary Metabolite Biosynthetic Genes
Daren W. Brown et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2014)
Comprehensive variation discovery in single human genomes
Neil I. Weisenfeld et al.
NATURE GENETICS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
GenomeTools: A Comprehensive Software Library for Efficient Processing of Structured Genome Annotations
Gordon Gremme et al.
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (2013)
The dispensable chromosome of Leptosphaeria maculans shelters an effector gene conferring avirulence towards Brassica rapa
Marie-Helene Balesdent et al.
NEW PHYTOLOGIST (2013)
Filamentous plant pathogen effectors in action
Martha C. Giraldo et al.
NATURE REVIEWS MICROBIOLOGY (2013)
Breakage-fusion-bridge Cycles and Large Insertions Contribute to the Rapid Evolution of Accessory Chromosomes in a Fungal Pathogen
Daniel Croll et al.
PLOS GENETICS (2013)
Telomere-Targeted Retrotransposons in the Rice Blast Fungus Magnaporthe oryzae: Agents of Telomere Instability
John H. Starnes et al.
GENETICS (2012)
Preparation of megabase-sized DNA from a variety of organisms using the nuclei method for advanced genomics research
Meiping Zhang et al.
NATURE PROTOCOLS (2012)
Genome evolution in filamentous plant pathogens: why bigger can be better
Sylvain Raffaele et al.
NATURE REVIEWS MICROBIOLOGY (2012)
Arms race co-evolution of Magnaporthe oryzae AVR-Pik and rice Pik genes driven by their physical interactions
Hiroyuki Kanzaki et al.
PLANT JOURNAL (2012)
Genome Structure and Reproductive Behaviour Influence the Evolutionary Potential of a Fungal Phytopathogen
Guillaume Daverdin et al.
PLOS PATHOGENS (2012)
Scaffolding pre-assembled contigs using SSPACE
Marten Boetzer et al.
BIOINFORMATICS (2011)
Pyricularia Blast - a Threat to Wheat Cultivation
M. M. Kohli et al.
CZECH JOURNAL OF GENETICS AND PLANT BREEDING (2011)
AVR1-CO39 Is a Predominant Locus Governing the Broad Avirulence of Magnaporthe oryzae 2539 on Cultivated Rice (Oryza sativa L.)
Yan Zheng et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations
Thierry Rouxel et al.
NATURE COMMUNICATIONS (2011)
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
Stephen B. Goodwin et al.
PLOS GENETICS (2011)
Multiple Translocation of the AVR-Pita Effector Gene among Chromosomes of the Rice Blast Fungus Magnaporthe oryzae and Related Species
Izumi Chuma et al.
PLOS PATHOGENS (2011)
Recent advances in rice blast effector research
Barbara Valent et al.
CURRENT OPINION IN PLANT BIOLOGY (2010)
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
Li-Jun Ma et al.
NATURE (2010)
The Magnaporthe oryzae Avirulence Gene AvrPiz-t Encodes a Predicted Secreted Protein That Triggers the Immunity in Rice Mediated by the Blast Resistance Gene Piz-t
Wei Li et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2009)
Assessing the gene space in draft genomes
Genis Parra et al.
NUCLEIC ACIDS RESEARCH (2009)
Interaction Transcriptome Analysis Identifies Magnaporthe oryzae BAS1-4 as Biotrophy-Associated Secreted Proteins in Rice Blast Disease
Gloria Mosquera et al.
PLANT CELL (2009)
The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion
Jeffrey J. Coleman et al.
PLOS GENETICS (2009)
RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences
James K. Hane et al.
BMC BIOINFORMATICS (2008)
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
David Ellinghaus et al.
BMC BIOINFORMATICS (2008)
Genome organization and evolution of the AVR-Pita avirulence gene family in the Magnaporthe grisea species complex
Chang Hyun Khang et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2008)
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
Brandi L. Cantarel et al.
GENOME RESEARCH (2008)
LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons
Zhao Xu et al.
NUCLEIC ACIDS RESEARCH (2007)
The 1.6 Mb chromosome carrying the avirulence gene AvrPik in Magnaporthe oryzae isolate 84R-62B is a chimera containing chromosome 1 sequences
Chao-Xi Luo et al.
MYCOLOGICAL RESEARCH (2007)
Evolution of an avirulence gene, AVR1-CO39, concomitant with the evolution and differentiation of Magnaporthe oryzae
Y Tosa et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2005)
The genome sequence of the rice blast fungus Magnaporthe grisea
RA Dean et al.
NATURE (2005)
Circular binary segmentation for the analysis of array-based DNA copy number data
AB Olshen et al.
BIOSTATISTICS (2004)
Repeat-induced point mutation (RIP) in Magnaporthe grisea:: implications for its sexual cycle in the natural field context
K Ikeda et al.
MOLECULAR MICROBIOLOGY (2002)
A telomeric avirulence gene determines efficacy for the rice blast resistance gene Pi-ta
MJ Orbach et al.
PLANT CELL (2000)
Ab initio gene finding in Drosophila genomic DNA
AA Salamov et al.
GENOME RESEARCH (2000)